RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZNF562Q6V9R5 426 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 C16orf92Q96LL3 132 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
NDE1-201ENST00000396354 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 CRXO43186 299 aaPredicted RBP7.16□□□□□ -1.26
NDE1-201ENST00000396354 TRBV12-3P01733 135 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 MDFIQ99750 246 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 PEF1Q9UBV8 284 aaKnown RBP7.16□□□□□ -1.26
NDE1-201ENST00000396354 ANKRD17O75179 2603 aaKnown RBP7.16□□□□□ -1.26
NDE1-201ENST00000396354 TRAV30A0A087WSZ9 112 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 TMEM78Q5T7P6 136 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 AMTNQ6UX39 209 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 ACANP16112 2415 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 MRPS12O15235 138 aaKnown RBP7.16□□□□□ -1.26
NDE1-201ENST00000396354 PRTN3P24158 256 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 FXYD2P54710 66 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 S100A7AQ86SG5 101 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 AGPAT4-IT1Q9H0P7 198 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
NDE1-201ENST00000396354 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
NDE1-201ENST00000396354 OVOL3O00110 214 aa7.15□□□□□ -1.26
NDE1-201ENST00000396354 SMIM12Q96EX1 92 aa7.15□□□□□ -1.26
NDE1-201ENST00000396354 WI2-2373I1.2A0A1W2PRP0 233 aa7.15□□□□□ -1.27
NDE1-201ENST00000396354 SRSF1Q07955 248 aaKnown RBP eCLIP7.15□□□□□ -1.27
NDE1-201ENST00000396354 SCGB2A2Q13296 93 aa7.15□□□□□ -1.27
NDE1-201ENST00000396354 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.27
NDE1-201ENST00000396354 SIRPDQ9H106 197 aa7.15□□□□□ -1.27
NDE1-201ENST00000396354 MRPL35Q9NZE8 188 aaKnown RBP7.15□□□□□ -1.27
NDE1-201ENST00000396354 IGHG4P01861 327 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 BMI1P35226 326 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 ARL3P36405 182 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 Q8N6K4 173 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 CD5LO43866 347 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 PPBPP02775 128 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 NPBQ8NG41 125 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 M0R1W7 72 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 EDN2P20800 178 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 LMO4P61968 165 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 FAM74A4Q5TZK3 123 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 MAPK1IP1LQ8NDC0 245 aa7.14□□□□□ -1.27
NDE1-201ENST00000396354 A6NDN8 102 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 SMIM17P0DL12 118 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 PF4V1P10720 104 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 TMEM95Q3KNT9 176 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 UNQ9165/PRO28630Q6UXU0 137 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 Q8N9W7 124 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
NDE1-201ENST00000396354 TEX15Q9BXT5 2789 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 FN1P02751 2386 aaKnown RBP7.13□□□□□ -1.27
NDE1-201ENST00000396354 F5H697 171 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
NDE1-201ENST00000396354 CCDC144NLQ6NUI1 221 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 C8orf86Q6ZUL3 223 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 MS4A6AQ9H2W1 248 aa7.13□□□□□ -1.27
NDE1-201ENST00000396354 GCN1Q92616 2671 aaKnown RBP7.13□□□□□ -1.27
NDE1-201ENST00000396354 PRR9Q5T870 116 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 LINC00477Q96M19 166 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 IGHV4-39P01824 125 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 FGF6P10767 208 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 Q6AWC8 147 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 METTL26Q96S19 204 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 BUB3O43684 328 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
NDE1-201ENST00000396354 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 K7ERU9 68 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 GNRH2O43555 120 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 SCGB2A1O75556 95 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 IGKCP01834 107 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 LYPD1Q8N2G4 141 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 NRGNQ92686 78 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 DUX5Q96PT3 197 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 CHAC1Q9BUX1 264 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 JPT2Q9H910 190 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 CYSLTR1Q9Y271 337 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 PRRC2AP48634 2157 aaKnown RBP7.11□□□□□ -1.27
NDE1-201ENST00000396354 A0A087WWL8 130 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 GTF2H5Q6ZYL4 71 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 MYOZ3Q8TDC0 251 aa7.11□□□□□ -1.27
NDE1-201ENST00000396354 FABP2P12104 132 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 PDE6HQ13956 83 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 Q6ZS46 218 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 RNF5Q99942 180 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 PHLDA3Q9Y5J5 127 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 TTC9CQ8N5M4 171 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 OR1N2Q8NGR9 330 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 TRBV25-1A0A075B6N4 114 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 H3BMG7 143 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 BLCAPP62952 87 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 ODF1Q14990 250 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms