RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 SRSF2Q01130 221 aaKnown RBP10.63□□□□□ -0.71
SNCA-204ENST00000394989 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 ORM1P02763 201 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 MRPL53Q96EL3 112 aaKnown RBP10.63□□□□□ -0.71
SNCA-204ENST00000394989 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 APCP25054 2843 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 Q6ZQT7 251 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
SNCA-204ENST00000394989 KIR3DS1Q14943 382 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 GTF2H5Q6ZYL4 71 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 OR2K2Q8NGT1 345 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
SNCA-204ENST00000394989 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
SNCA-204ENST00000394989 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 MSRB1Q9NZV6 116 aa10.62□□□□□ -0.71
SNCA-204ENST00000394989 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 D6R8Y8 96 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 SOCS3O14543 225 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 TGFAP01135 160 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 CNFNQ9BYD5 112 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 SPCS1Q9Y6A9 102 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 U3KQK5 164 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 CIDEAO60543 219 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
SNCA-204ENST00000394989 TWIST1Q15672 202 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
SNCA-204ENST00000394989 TENM4Q6N022 2769 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 CR1P17927 2039 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
SNCA-204ENST00000394989 SAMD13Q5VXD3 122 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 G3V4G9 280 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 EDN2P20800 178 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 FA2HQ7L5A8 372 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
SNCA-204ENST00000394989 DEFB1P60022 68 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 CACNG7P62955 275 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 PRR9Q5T870 116 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 COX8AP10176 69 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 GCSHP23434 173 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 PSMB8P28062 276 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 NAV2Q8IVL1 2488 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 J3QLI3 93 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 K7ERJ3 54 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
SNCA-204ENST00000394989 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
SNCA-204ENST00000394989 TEX48A0A1B0GUV7 120 aa10.58□□□□□ -0.72
SNCA-204ENST00000394989 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
SNCA-204ENST00000394989 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
SNCA-204ENST00000394989 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
SNCA-204ENST00000394989 AKAP9Q99996 3911 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 FSHBP01225 129 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 PET117Q6UWS5 81 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 A0A096LNJ9 63 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 IGHV4-31P0DP07 118 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 AZU1P20160 251 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 RHPN1-AS1Q9BWJ2 59 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 CUBNO60494 3623 aa10.57□□□□□ -0.72
SNCA-204ENST00000394989 A6NDN8 102 aa10.56□□□□□ -0.72
SNCA-204ENST00000394989 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
SNCA-204ENST00000394989 NPYP01303 97 aa10.56□□□□□ -0.72
SNCA-204ENST00000394989 ZNF747Q9BV97 191 aa10.56□□□□□ -0.72
SNCA-204ENST00000394989 IGKV3-7A0A075B6H7 116 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 K7EP34 96 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
SNCA-204ENST00000394989 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 F6UB75 175 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 CKS2P33552 79 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
SNCA-204ENST00000394989 DEFB113Q30KQ7 82 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 SRD5A1P18405 259 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 SEC11AP67812 179 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
SNCA-204ENST00000394989 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms