RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 SH2D1AO60880 128 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 DPM2O94777 84 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 PAX8Q06710 450 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 ECSCRQ19T08 205 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 KLK15Q9H2R5 256 aa7.73□□□□□ -1.17
PSEN1-204ENST00000394164 IGSF10Q6WRI0 2623 aa7.72□□□□□ -1.17
PSEN1-204ENST00000394164 IGKV2-40A0A087WW87 121 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-204ENST00000394164 IGKV2D-40P01614 121 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-204ENST00000394164 SMIM20Q8N5G0 67 aa7.72□□□□□ -1.17
PSEN1-204ENST00000394164 CFHR4Q92496 578 aa7.72□□□□□ -1.17
PSEN1-204ENST00000394164 RNF125Q96EQ8 232 aa7.72□□□□□ -1.17
PSEN1-204ENST00000394164 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
PSEN1-204ENST00000394164 ZANQ9Y493 2812 aa7.71□□□□□ -1.17
PSEN1-204ENST00000394164 LINC01549A6NIU2 74 aa7.71□□□□□ -1.17
PSEN1-204ENST00000394164 C19orf84I3L1E1 186 aa7.71□□□□□ -1.17
PSEN1-204ENST00000394164 CREBBPQ92793 2442 aa7.71□□□□□ -1.18
PSEN1-204ENST00000394164 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.18
PSEN1-204ENST00000394164 LY6G5BQ8NDX9 201 aa7.71□□□□□ -1.18
PSEN1-204ENST00000394164 HOXA3O43365 443 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-204ENST00000394164 HLA-DRB4P13762 266 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 HLA-DMBP28068 263 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 EFNA4P52798 201 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 TMEM219Q86XT9 240 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 U3KQK5 164 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 HLA-DRB4X5D2U9 266 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 ABCA12Q86UK0 2595 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 TLN2Q9Y4G6 2542 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 TRAV26-2A0A0B4J265 109 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 ORM1P02763 201 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 GNLYP22749 145 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 PRTN3P24158 256 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 FBXL19-AS1Q494R0 122 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 MORN3Q6PF18 240 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-204ENST00000394164 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 BPESC1Q9GZL8 116 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-204ENST00000394164 GAGE5Q13069 117 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 GAGE6Q13070 117 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 C11orf71Q6IPW1 123 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 C3orf56Q8N813 242 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 DEFB104AQ8WTQ1 72 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 FANCD2OSQ96PS1 177 aa7.7□□□□□ -1.18
PSEN1-204ENST00000394164 A0A1B0GW15 77 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 G3V318 75 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 UCNP55089 124 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 OR11H6Q8NGC7 330 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 TRBV19A0A075B6N1 114 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 OR11H12B2RN74 326 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-204ENST00000394164 TEX29Q8N6K0 151 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 OR11H1Q8NG94 326 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 DLX4Q92988 240 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-204ENST00000394164 ABCA2Q9BZC7 2435 aa7.69□□□□□ -1.18
PSEN1-204ENST00000394164 CCDC179H3BU77 68 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-204ENST00000394164 Q6AWC8 147 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 ZFAND6Q6FIF0 208 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 SIGLEC15Q6ZMC9 328 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 SHANK2-AS3Q9BTD1 123 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 C21orf62Q9NYP8 219 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 BRD3OSQ6XYD6 125 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 C1orf122Q6ZSJ8 110 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 ZMAT4Q9H898 229 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 TRBV7-9A0A0J9YWB2 115 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 SAA4P35542 130 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 MFAP4P55083 255 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 GATD1Q8NB37 220 aa7.68□□□□□ -1.18
PSEN1-204ENST00000394164 SRSF9Q13242 221 aaKnown RBP eCLIP7.67□□□□□ -1.18
PSEN1-204ENST00000394164 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 TRBV7-3A0A075B6L6 115 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 ODF3BA8MYP8 253 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 PVRIGQ6DKI7 326 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 MYOZ3Q8TDC0 251 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 AJUBAQ96IF1 538 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 ZNF462Q96JM2 2506 aa7.67□□□□□ -1.18
PSEN1-204ENST00000394164 PTPN13Q12923 2485 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 IGHV7-81A0A0B4J1V7 117 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 F8W735 103 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-204ENST00000394164 H3BRN7 92 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 CLEC3BP05452 202 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 C15orf32Q32M92 178 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 RNF182Q8N6D2 247 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 IGLV11-55A0A075B6I3 123 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 M0R1W7 72 aa7.66□□□□□ -1.18
PSEN1-204ENST00000394164 H7C2G1 150 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 ATP6V0E1O15342 81 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 SPRY2O43597 315 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 TRGV3P03979 118 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 SCGB1C2P0DMR2 95 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 CLEC19AQ6UXS0 136 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms