RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SRIP30626 198 aa14.62□□□□□ -0.07
RAB5C-202ENST00000393860 TRAV2A0A0B4J234 112 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 CTRLP40313 264 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 FXYD7P58549 80 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 SPINK13Q1W4C9 94 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 APRG1Q8IVJ8 170 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 HIST3H2BBQ8N257 126 aa14.61□□□□□ -0.07
RAB5C-202ENST00000393860 KLLNB2CW77 178 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 SPAG8Q99932 426 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-202ENST00000393860 ZNF256Q9Y2P7 627 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-202ENST00000393860 TIMM8BQ9Y5J9 83 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-202ENST00000393860 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 TRBV7-9A0A0J9YWB2 115 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 OR4C46A6NHA9 309 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 PF4P02776 101 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 ANXA2RQ3ZCQ2 193 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 TMEM256Q8N2U0 113 aa14.6□□□□□ -0.07
RAB5C-202ENST00000393860 DUSP14O95147 198 aaKnown RBP14.59□□□□□ -0.07
RAB5C-202ENST00000393860 LEPP41159 167 aa14.59□□□□□ -0.07
RAB5C-202ENST00000393860 SIGLEC8Q9NYZ4 499 aa14.59□□□□□ -0.07
RAB5C-202ENST00000393860 TP53TG3Q9ULZ0 132 aa14.59□□□□□ -0.07
RAB5C-202ENST00000393860 SPRY2O43597 315 aa14.58□□□□□ -0.07
RAB5C-202ENST00000393860 TWIST1Q15672 202 aa14.58□□□□□ -0.07
RAB5C-202ENST00000393860 MSRB1Q9NZV6 116 aa14.58□□□□□ -0.07
RAB5C-202ENST00000393860 H3BVH4 76 aa14.58□□□□□ -0.08
RAB5C-202ENST00000393860 NTF3P20783 257 aa14.58□□□□□ -0.08
RAB5C-202ENST00000393860 TRAV25A0A0B4J276 109 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 C7orf71A4D174 169 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 NUPR1O60356 82 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 IQCJQ1A5X6 159 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 COA6Q5JTJ3 125 aaKnown RBP14.57□□□□□ -0.08
RAB5C-202ENST00000393860 AMTNQ6UX39 209 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 ODF3Q96PU9 254 aa14.57□□□□□ -0.08
RAB5C-202ENST00000393860 RBMY1BA6NDE4 496 aaKnown RBP14.56□□□□□ -0.08
RAB5C-202ENST00000393860 RBMY1EA6NEQ0 496 aaKnown RBP14.56□□□□□ -0.08
RAB5C-202ENST00000393860 GNRH2O43555 120 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 RBMY1DP0C7P1 496 aaKnown RBP14.56□□□□□ -0.08
RAB5C-202ENST00000393860 HLA-DRB4P13762 266 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 ODF3L2Q3SX64 289 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 OR10AG1Q8NH19 301 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 HLA-DRB4X5D2U9 266 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 H3BMM0 161 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
RAB5C-202ENST00000393860 NIPBLQ6KC79 2804 aaeCLIP14.55□□□□□ -0.08
RAB5C-202ENST00000393860 S100A8P05109 93 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 FABP4P15090 132 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 S100A2P29034 98 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 CDKN1BP46527 198 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 LINC00310P59036 64 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 LINC00482Q8N8I6 264 aa14.55□□□□□ -0.08
RAB5C-202ENST00000393860 ALKBH7Q9BT30 221 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-202ENST00000393860 LOC102724200A0A096LPH7 203 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-202ENST00000393860 A0A1B0GW15 77 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 GATD1Q8NB37 220 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 SPATA3Q8NHX4 192 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 SERF1AO75920 110 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 IGLV1-51P01701 117 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 RCHY1Q96PM5 261 aa14.54□□□□□ -0.08
RAB5C-202ENST00000393860 ZNF324O75467 553 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-202ENST00000393860 TSPOP30536 169 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 ASIPP42127 132 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 AMN1Q8IY45 258 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 C18orf32Q8TCD1 76 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 S100A4P26447 101 aaKnown RBP14.53□□□□□ -0.08
RAB5C-202ENST00000393860 Q0VG73 95 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 FAM159AQ6UWV7 190 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 HIST1H2BLQ99880 126 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 CNFNQ9BYD5 112 aa14.53□□□□□ -0.08
RAB5C-202ENST00000393860 ZNF493Q6ZR52 646 aa14.52□□□□□ -0.09
RAB5C-202ENST00000393860 SNAI2O43623 268 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 AMBPP02760 352 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 OR10J3Q5JRS4 329 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 OR10D4PQ8NGN7 298 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 CITED1Q99966 193 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 TENM1Q9UKZ4 2725 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 OR11H12B2RN74 326 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 OR5AL1P0C617 328 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 RBMY1A1P0DJD3 496 aaKnown RBP14.51□□□□□ -0.09
RAB5C-202ENST00000393860 RBMY1CP0DJD4 496 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 RBMY1FQ15415 496 aaKnown RBP14.51□□□□□ -0.09
RAB5C-202ENST00000393860 SPANXN1Q5VSR9 72 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 JMJD1CQ15652 2540 aa14.51□□□□□ -0.09
RAB5C-202ENST00000393860 A8MTW9 85 aa14.5□□□□□ -0.09
RAB5C-202ENST00000393860 CD7P09564 240 aa14.5□□□□□ -0.09
RAB5C-202ENST00000393860 BTF3P20290 206 aaKnown RBP14.5□□□□□ -0.09
RAB5C-202ENST00000393860 FAM104BQ5XKR9 115 aa14.5□□□□□ -0.09
RAB5C-202ENST00000393860 WFDC10AQ9H1F0 79 aa14.5□□□□□ -0.09
RAB5C-202ENST00000393860 M0R381 172 aa14.49□□□□□ -0.09
RAB5C-202ENST00000393860 CRXO43186 299 aaPredicted RBP14.49□□□□□ -0.09
RAB5C-202ENST00000393860 RNASE3P12724 160 aaKnown RBP14.49□□□□□ -0.09
RAB5C-202ENST00000393860 MRPL51Q4U2R6 128 aaKnown RBP14.49□□□□□ -0.09
RAB5C-202ENST00000393860 SMKR1H3BMG3 65 aa14.48□□□□□ -0.09
RAB5C-202ENST00000393860 PACRGQ96M98 296 aaPredicted RBP14.48□□□□□ -0.09
RAB5C-202ENST00000393860 D6R8Y8 96 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 EVI2AP22794 236 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 KRTAP24-1Q3LI83 254 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 STHQ8IWL8 128 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 KCNS1Q96KK3 526 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 TMEM191AQ9H0A3 160 aa14.47□□□□□ -0.09
RAB5C-202ENST00000393860 PHLDA3Q9Y5J5 127 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms