RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLAQ13239 276 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 ZNF124Q15973 351 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 APRG1Q8IVJ8 170 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 TIMM8BQ9Y5J9 83 aaPredicted RBP6.43□□□□□ -1.38
TDP1-203ENST00000393454 TRAV12-2A0A075B6T6 113 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 KLLNB2CW77 178 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 IGLC6P0CF74 106 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 AKR1D1P51857 326 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 FXYD7P58549 80 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 TWIST1Q15672 202 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 SPINK13Q1W4C9 94 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 PDZD11Q5EBL8 140 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 ZNF575Q86XF7 245 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
TDP1-203ENST00000393454 ZNF256Q9Y2P7 627 aaPredicted RBP6.42□□□□□ -1.38
TDP1-203ENST00000393454 A0A1B0GW15 77 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 C7orf71A4D174 169 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 UBE2CO00762 179 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 HLA-DRB4P13762 266 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 HOXA5P20719 270 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 CDKN1BP46527 198 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 ANXA2RQ3ZCQ2 193 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 GFI1BQ5VTD9 330 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 HLA-DRB4X5D2U9 266 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 ATRQ13535 2644 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 OR11H12B2RN74 326 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 F2Z2F3 143 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 H3BMM0 161 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 NTF3P20783 257 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 S100A4P26447 101 aaKnown RBP6.41□□□□□ -1.38
TDP1-203ENST00000393454 SRIP30626 198 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 CTRLP40313 264 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 FAM159AQ6UWV7 190 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 LINC00482Q8N8I6 264 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 TENM1Q9UKZ4 2725 aa6.41□□□□□ -1.38
TDP1-203ENST00000393454 H3BVH4 76 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 GNRH2O43555 120 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 IGLV1-51P01701 117 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 S100A2P29034 98 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 ASIPP42127 132 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 CITED1Q99966 193 aa6.4□□□□□ -1.38
TDP1-203ENST00000393454 ODF3L2Q3SX64 289 aa6.4□□□□□ -1.39
TDP1-203ENST00000393454 AMTNQ6UX39 209 aa6.4□□□□□ -1.39
TDP1-203ENST00000393454 CMC4P56277 68 aaPredicted RBP6.39□□□□□ -1.39
TDP1-203ENST00000393454 SPANXN1Q5VSR9 72 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 STHQ8IWL8 128 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 HIST3H2BBQ8N257 126 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 OR2K2Q8NGT1 345 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 OR10AG1Q8NH19 301 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 KCNS1Q96KK3 526 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 MSRB1Q9NZV6 116 aa6.39□□□□□ -1.39
TDP1-203ENST00000393454 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1BA6NDE4 496 aaKnown RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1EA6NEQ0 496 aaKnown RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 SPRY2O43597 315 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 ZNF324O75467 553 aaPredicted RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 CD7P09564 240 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1DP0C7P1 496 aaKnown RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 TMEM256Q8N2U0 113 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 PHLDA3Q9Y5J5 127 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 OR5AL1P0C617 328 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 CACNG7P62955 275 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 Q0VG73 95 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 IQCJQ1A5X6 159 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 KRTAP24-1Q3LI83 254 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 COA6Q5JTJ3 125 aaKnown RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 ZNF493Q6ZR52 646 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 SMIM15Q7Z3B0 74 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
TDP1-203ENST00000393454 CNFNQ9BYD5 112 aa6.38□□□□□ -1.39
TDP1-203ENST00000393454 IGHV1OR15-1A0A075B7D0 117 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 M0R381 172 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 SNAI2O43623 268 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 FABP4P15090 132 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 HTN1P15515 57 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 OR10J3Q5JRS4 329 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 AMN1Q8IY45 258 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 IFITM10A6NMD0 228 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 A8MTW9 85 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 SERF1AO75920 110 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 BEAN1Q3B7T3 259 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 C9orf66Q5T8R8 295 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 FAM104BQ5XKR9 115 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 C18orf32Q8TCD1 76 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 TP53TG3Q9ULZ0 132 aa6.37□□□□□ -1.39
TDP1-203ENST00000393454 CBY3A6NI87 242 aa6.36□□□□□ -1.39
TDP1-203ENST00000393454 CRXO43186 299 aaPredicted RBP6.36□□□□□ -1.39
TDP1-203ENST00000393454 NUPR1O60356 82 aa6.36□□□□□ -1.39
TDP1-203ENST00000393454 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
TDP1-203ENST00000393454 SPATA3Q8NHX4 192 aa6.36□□□□□ -1.39
TDP1-203ENST00000393454 WFDC10AQ9H1F0 79 aa6.36□□□□□ -1.39
TDP1-203ENST00000393454 D6R8Y8 96 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 INSP01308 110 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1A1P0DJD3 496 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
TDP1-203ENST00000393454 RNASE3P12724 160 aaKnown RBP6.35□□□□□ -1.39
TDP1-203ENST00000393454 EVI2AP22794 236 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms