RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 UNQ5815/PRO19632Q6UWF5 114 aa0.73□□□□□ -2.29
TRAJ40-201ENST00000390497 LYPD5Q6UWN5 251 aa0.73□□□□□ -2.29
TRAJ40-201ENST00000390497 ATG5Q9H1Y0 275 aa0.73□□□□□ -2.29
TRAJ40-201ENST00000390497 ROS1P08922 2347 aa0.73□□□□□ -2.29
TRAJ40-201ENST00000390497 DISP2A7MBM2 1401 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 ARPC5O15511 151 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 NCR2O95944 276 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 PRB3Q04118 309 aaPredicted RBP0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 SMCO1Q147U7 214 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 Q86TA4 180 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 ATP6V0E2Q8NHE4 81 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 MRPL36Q9P0J6 103 aaKnown RBP0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 DNAJC15Q9Y5T4 150 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 LAMA4Q16363 1823 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 CNTRLQ7Z7A1 2325 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 CTTNBP2Q8WZ74 1663 aa0.72□□□□□ -2.29
TRAJ40-201ENST00000390497 TENM1Q9UKZ4 2725 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 TRBV10-1A0A0K0K1A3 114 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 CKS1BP61024 79 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 NCS1P62166 190 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 SPINK9Q5DT21 86 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 MAFIPQ8WZ33 124 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 COPZ2Q9P299 210 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 COMMD3Q9UBI1 195 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 PTPRFP10586 1907 aa0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 BLMP54132 1417 aaPredicted RBP0.71□□□□□ -2.3
TRAJ40-201ENST00000390497 J3QR89 54 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 APOC1P02654 83 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 IL7P13232 177 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 FXYD3Q14802 87 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 SPINK13Q1W4C9 94 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 SLC25A26Q70HW3 274 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 SNX29P2Q8IUI4 249 aa0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 NOP16Q9Y3C1 178 aaKnown RBP0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 XIRP1Q702N8 1843 aaKnown RBP0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 PRG4Q92954 1404 aaPredicted RBP0.7□□□□□ -2.3
TRAJ40-201ENST00000390497 TEX49A0A1B0GTD5 131 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 LOC105371267A0A1B0GV96 52 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 CCDC179H3BU77 68 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 J3QLW9 94 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 M0R2P5 195 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 IGKCP01834 107 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 TSPAN19P0C672 248 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 SPINT3P49223 89 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 CLLU1Q5K131 121 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 ATP11AUNQ6ZP68 121 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 NDUFA11Q86Y39 141 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 DYNLRB2Q8TF09 96 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 PPP1R1CQ8WVI7 109 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 KRTAP4-1Q9BYQ7 146 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 SAR1AQ9NR31 198 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 PAIP2BQ9ULR5 123 aaKnown RBP0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 KIDINS220Q9ULH0 1771 aa0.69□□□□□ -2.3
TRAJ40-201ENST00000390497 HEATR1Q9H583 2144 aaKnown RBP0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 ZCCHC6Q5VYS8 1495 aaKnown RBP0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 LRP5O75197 1615 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 TRBV20-1A0A075B6N2 111 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 NBDYA0A0U1RRE5 68 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 MPC1LP0DKB6 136 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 ANK1P16157 1881 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 HIST1H1AQ02539 215 aaPredicted RBP0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 SMIM21Q3B7S5 101 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 UNC13CQ8NB66 2214 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 PTPRDP23468 1912 aa0.68□□□□□ -2.3
TRAJ40-201ENST00000390497 TRAV17A0A0B4J275 112 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 M0R2Z0 102 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 S100A12P80511 92 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 KLKP1Q107X0 134 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 IQCJQ1A5X6 159 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 GLYATL3Q5SZD4 288 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 CTAGE3PQ8IX95 158 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 C5orf56Q8N8D9 126 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 PFDN5Q99471 154 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 SMIM3Q9BZL3 60 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 ERG28Q9UKR5 140 aa0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 LSM2Q9Y333 95 aaKnown RBP0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 MYO18AQ92614 2054 aaKnown RBP0.67□□□□□ -2.3
TRAJ40-201ENST00000390497 TRAV12-2A0A075B6T6 113 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 CXorf51AA0A1B0GTR3 108 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 FXYD1O00168 92 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 CCKP06307 115 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 ZNF137PP52743 207 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 CASP8AP2Q9UKL3 1982 aa0.66□□□□□ -2.3
TRAJ40-201ENST00000390497 TET1Q8NFU7 2136 aa0.65□□□□□ -2.3
TRAJ40-201ENST00000390497 MYOM3Q5VTT5 1437 aa0.65□□□□□ -2.3
TRAJ40-201ENST00000390497 LOC101927531A0A1B0GV80 90 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 MCRIP1C9JLW8 97 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 IGLC6P0CF74 106 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 COX4I1P13073 169 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 C6orf52Q5T4I8 152 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 VSTM2AQ8TAG5 236 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 TCEAL4Q96EI5 215 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 LINC00208Q96KT6 92 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 COA4Q9NYJ1 87 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 ERCC6Q03468 1493 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 SYNJ1O43426 1573 aa0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
TRAJ40-201ENST00000390497 TCRBV3S1A0A5B6 114 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms