RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SPXQ9BT56 116 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 KAAG1Q9UBP8 84 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 TEX22C9J3V5 150 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 BRD3OSQ6XYD6 125 aa10.29□□□□□ -0.76
TRAPPC9-201ENST00000389328 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 DUX3Q96PT4 197 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 TRBV7-1A0A0A6YYK4 115 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 SAA4P35542 130 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 ODF1Q14990 250 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
TRAPPC9-201ENST00000389328 OOSP1A8MZH6 123 aa10.27□□□□□ -0.76
TRAPPC9-201ENST00000389328 PRAC2D3DTV9 90 aa10.27□□□□□ -0.76
TRAPPC9-201ENST00000389328 M0R2P5 195 aa10.27□□□□□ -0.76
TRAPPC9-201ENST00000389328 C8orf31Q8N9H6 132 aa10.27□□□□□ -0.76
TRAPPC9-201ENST00000389328 DNAL4O96015 105 aa10.27□□□□□ -0.77
TRAPPC9-201ENST00000389328 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-201ENST00000389328 ATP5J2P56134 94 aa10.27□□□□□ -0.77
TRAPPC9-201ENST00000389328 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
TRAPPC9-201ENST00000389328 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.77
TRAPPC9-201ENST00000389328 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 RHPN1-AS1Q9BWJ2 59 aa10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 RNASE1P07998 156 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 LRP4O75096 1905 aa10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 FAM110DQ8TAY7 271 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
TRAPPC9-201ENST00000389328 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 UBE2L6O14933 153 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 PMVKQ15126 192 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 C2orf91Q6ZV80 131 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 OR11H6Q8NGC7 330 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 TECTAO75443 2155 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 TCF15Q12870 199 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 RPL39LQ96EH5 51 aaKnown RBP10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 MOB4Q9Y3A3 225 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 OVOL3O00110 214 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 FGF6P10767 208 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 PIMREGQ9BSJ6 248 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 PRO1854Q9UHT4 67 aa10.25□□□□□ -0.77
TRAPPC9-201ENST00000389328 MYCNOSP40205 109 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 F6UB75 175 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 CTSGP08311 255 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 C22orf34Q6ZV56 151 aa10.24□□□□□ -0.77
TRAPPC9-201ENST00000389328 ZNF493Q6ZR52 646 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 GNRH2O43555 120 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 IGLV1-47P01700 117 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 CRIP1P50238 77 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 RANBP2P49792 3224 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 LINC01587Q99440 93 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 SHISA9B4DS77 424 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 SLC25A20O43772 301 aa10.23□□□□□ -0.77
TRAPPC9-201ENST00000389328 IGLV11-55A0A075B6I3 123 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 ITLN2Q8WWU7 325 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 IGFL3Q6UXB1 125 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 TIMM21Q9BVV7 248 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 ADARB2-AS1A8MUL3 147 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 PTH2Q96A98 100 aa10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 SPAG8Q99932 426 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-201ENST00000389328 H3BUX3 64 aa10.21□□□□□ -0.77
TRAPPC9-201ENST00000389328 J3QQQ9 107 aa10.21□□□□□ -0.77
TRAPPC9-201ENST00000389328 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC9-201ENST00000389328 LINC00574Q9H8X3 128 aa10.21□□□□□ -0.77
TRAPPC9-201ENST00000389328 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 UNC80Q8N2C7 3258 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 IGFL2Q6UWQ7 119 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 NTN5Q8WTR8 489 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 C20orf78Q9BR46 151 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 C1QTNF4Q9BXJ3 329 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 BPESC1Q9GZL8 116 aa10.21□□□□□ -0.78
TRAPPC9-201ENST00000389328 NACAE9PAV3 2078 aa10.2□□□□□ -0.78
TRAPPC9-201ENST00000389328 KNCNA6PVL3 124 aa10.2□□□□□ -0.78
TRAPPC9-201ENST00000389328 YAE1D1Q9NRH1 226 aa10.2□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
TRAPPC9-201ENST00000389328 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 B5MCH6 92 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 KLK9Q9UKQ9 250 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 UCNP55089 124 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 TLN1Q9Y490 2541 aaKnown RBP10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 BUB3O43684 328 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 DEFB1P60022 68 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 GRNP28799 593 aaKnown RBP10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 PHLDA1Q8WV24 401 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms