RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 VOPP1Q96AW1 172 aa8.6□□□□□ -1.03
LINC00654-201ENST00000379053 ESM1Q9NQ30 184 aa8.6□□□□□ -1.03
LINC00654-201ENST00000379053 ZNF491Q8N8L2 437 aa8.6□□□□□ -1.03
LINC00654-201ENST00000379053 C8orf31Q8N9H6 132 aa8.6□□□□□ -1.03
LINC00654-201ENST00000379053 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 GYPEP15421 78 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 HERVK_113P63121 156 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
LINC00654-201ENST00000379053 AJUBAQ96IF1 538 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
LINC00654-201ENST00000379053 CT83Q5H943 113 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 C16orf74Q96GX8 76 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 PCNX2A6NKB5 2137 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 CRLF1O75462 422 aa8.59□□□□□ -1.03
LINC00654-201ENST00000379053 GTF3C1Q12789 2109 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 RSPO1Q2MKA7 263 aaPredicted RBP8.58□□□□□ -1.04
LINC00654-201ENST00000379053 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
LINC00654-201ENST00000379053 BUB3O43684 328 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 NPSP0C0P6 89 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 STPG4Q8N801 248 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 SOCS3O14543 225 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 GNRH2O43555 120 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 POLR3KQ9Y2Y1 108 aaPredicted RBP8.58□□□□□ -1.04
LINC00654-201ENST00000379053 HLA-DMBP28068 263 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 ZNF503Q96F45 646 aa8.58□□□□□ -1.04
LINC00654-201ENST00000379053 SONP18583 2426 aaKnown RBP8.58□□□□□ -1.04
LINC00654-201ENST00000379053 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 TIRAPP58753 221 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 OTOGLQ3ZCN5 2332 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 ZSWIM8A7E2V4 1837 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 A0A087WW49 117 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 ATP6V0E2Q8NHE4 81 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
LINC00654-201ENST00000379053 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 LOXL1Q08397 574 aaPredicted RBP8.57□□□□□ -1.04
LINC00654-201ENST00000379053 CYYR1Q96J86 154 aa8.57□□□□□ -1.04
LINC00654-201ENST00000379053 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 C9JAW5 83 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 ZC2HC1AQ96GY0 325 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 LYL1P12980 280 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 DYNAPQ8N1N2 210 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 TP53BP1Q12888 1972 aaPredicted RBP8.56□□□□□ -1.04
LINC00654-201ENST00000379053 SPG11Q96JI7 2443 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 AGPAT4-IT1Q9H0P7 198 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 SPATA25Q9BR10 227 aa8.56□□□□□ -1.04
LINC00654-201ENST00000379053 C11orf53Q8IXP5 236 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 PTPN13Q12923 2485 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
LINC00654-201ENST00000379053 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
LINC00654-201ENST00000379053 DEFB4AO15263 64 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 NDUFS5O43920 106 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 POU2AF1Q16633 256 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 IGLL5B9A064 214 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 RNF152Q8N8N0 203 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 SPANXA1Q9NS26 97 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 DOCK11Q5JSL3 2073 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 DEFB105AQ8NG35 78 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
LINC00654-201ENST00000379053 HILS1P60008 231 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 NPBQ8NG41 125 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 CRYGCP07315 174 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 CFPP27918 469 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 C5orf38Q86SI9 138 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 C9JQL5 133 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 HAMPP81172 84 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 ETDBQ3ZM63 59 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 CFHR4Q92496 578 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 ANK1P16157 1881 aa8.54□□□□□ -1.04
LINC00654-201ENST00000379053 Q6ZWC4 215 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 C5orf56Q8N8D9 126 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 DSCR8Q96T75 97 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 LY6G6DO95868 133 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 WDR81Q562E7 1941 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 INAFM2P0DMQ5 153 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 hADV29S1A0JD25 119 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 C2orf70A6NJV1 201 aa8.53□□□□□ -1.04
LINC00654-201ENST00000379053 K7EQD1 137 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms