RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 CD33P20138 364 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 PRR9Q5T870 116 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 OR9G4Q8NGQ1 327 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 PEMTQ9UBM1 199 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 TP53TG3Q9ULZ0 132 aa9.72□□□□□ -0.85
TRIM40-206ENST00000376724 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
TRIM40-206ENST00000376724 SRSF2Q01130 221 aaKnown RBP9.71□□□□□ -0.86
TRIM40-206ENST00000376724 RIGQ13278 110 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 BATFQ16520 125 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 Q6AWC8 147 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 CITED2Q99967 270 aaPredicted RBP9.71□□□□□ -0.86
TRIM40-206ENST00000376724 C16orf95Q9H693 158 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
TRIM40-206ENST00000376724 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 CDKN1BP46527 198 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
TRIM40-206ENST00000376724 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 SAMD13Q5VXD3 122 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 FER1L6-AS1Q8NA97 138 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 RNASE8Q8TDE3 154 aaKnown RBP9.7□□□□□ -0.86
TRIM40-206ENST00000376724 RAX2Q96IS3 184 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 C20orf202A1L168 122 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 K7EQG2 157 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 SERF1AO75920 110 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 GPX1P07203 203 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 LINC01559Q495D7 138 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 LENEPQ9Y5L5 61 aa9.7□□□□□ -0.86
TRIM40-206ENST00000376724 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
TRIM40-206ENST00000376724 Q0VG73 95 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 KIR3DS1Q14943 382 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 TDRG1Q3Y452 100 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 JMJD8Q96S16 334 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 RNF114Q9Y508 228 aa9.69□□□□□ -0.86
TRIM40-206ENST00000376724 IGKV3-20P01619 116 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 K7EP13 123 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 CCL24O00175 119 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 CSN3P07498 182 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 LINC00310P59036 64 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 TWIST1Q15672 202 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 OR10J3Q5JRS4 329 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 Q6ZWC4 215 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 DYNLRB2Q8TF09 96 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 ALKBH7Q9BT30 221 aaPredicted RBP9.68□□□□□ -0.86
TRIM40-206ENST00000376724 PAM16Q9Y3D7 125 aa9.68□□□□□ -0.86
TRIM40-206ENST00000376724 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
TRIM40-206ENST00000376724 ESDP10768 282 aa9.67□□□□□ -0.86
TRIM40-206ENST00000376724 NTF3P20783 257 aa9.67□□□□□ -0.86
TRIM40-206ENST00000376724 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
TRIM40-206ENST00000376724 RCHY1Q96PM5 261 aa9.67□□□□□ -0.86
TRIM40-206ENST00000376724 A0A1B0GW15 77 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 CCL25O15444 150 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 EBLN2Q6P2I7 272 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 LOC102724200A0A096LPH7 203 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-206ENST00000376724 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 CTRLP40313 264 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 TMEM61Q8N0U2 210 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
TRIM40-206ENST00000376724 TIMM8BQ9Y5J9 83 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-206ENST00000376724 A0A0J9YX75 114 aa9.65□□□□□ -0.86
TRIM40-206ENST00000376724 NDUFA7O95182 113 aa9.65□□□□□ -0.86
TRIM40-206ENST00000376724 SETD2Q9BYW2 2564 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-206ENST00000376724 FHL3Q13643 280 aa9.65□□□□□ -0.87
TRIM40-206ENST00000376724 NSUN5P1Q3KNT7 163 aa9.65□□□□□ -0.87
TRIM40-206ENST00000376724 SAMD10Q9BYL1 202 aa9.65□□□□□ -0.87
TRIM40-206ENST00000376724 PROK1P58294 105 aa9.64□□□□□ -0.87
TRIM40-206ENST00000376724 DEFB114Q30KQ6 69 aa9.64□□□□□ -0.87
TRIM40-206ENST00000376724 CD300EQ496F6 205 aaPredicted RBP9.64□□□□□ -0.87
TRIM40-206ENST00000376724 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
TRIM40-206ENST00000376724 DEFB131AP59861 70 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 UBE2V1Q13404 147 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 STPG4Q8N801 248 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 TRAV12-2A0A075B6T6 113 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 TRAV12-3A0A0B4J271 114 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 H3BVH4 76 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 M0R2Z0 102 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 PMCHP20382 165 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 GATD1Q8NB37 220 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
TRIM40-206ENST00000376724 SORL1Q92673 2214 aa9.62□□□□□ -0.87
TRIM40-206ENST00000376724 KLLNB2CW77 178 aa9.62□□□□□ -0.87
TRIM40-206ENST00000376724 SPRY2O43597 315 aa9.62□□□□□ -0.87
TRIM40-206ENST00000376724 S100A4P26447 101 aaKnown RBP9.62□□□□□ -0.87
TRIM40-206ENST00000376724 RNASEKQ6P5S7 137 aaKnown RBP9.62□□□□□ -0.87
TRIM40-206ENST00000376724 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
TRIM40-206ENST00000376724 WNK1Q9H4A3 2382 aa9.62□□□□□ -0.87
TRIM40-206ENST00000376724 GNRH2O43555 120 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms