RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 C11orf44Q8N8P7 122 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 ZNF324O75467 553 aaPredicted RBP8.25□□□□□ -1.09
PDPN-202ENST00000376057 FRMD6-AS1P0C7T7 363 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 ESDP10768 282 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 INSL3P51460 131 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
PDPN-202ENST00000376057 CACNG7P62955 275 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 LINC00467Q9BRT7 94 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 H3BMM0 161 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 GZMBP10144 247 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.25□□□□□ -1.09
PDPN-202ENST00000376057 KCNS1Q96KK3 526 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 SCRT2Q9NQ03 307 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 C7orf71A4D174 169 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 CDKN1BP46527 198 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 TFPI2P48307 235 aa8.25□□□□□ -1.09
PDPN-202ENST00000376057 AMBPP02760 352 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 ARMS2P0C7Q2 107 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 PRB4P10163 310 aaPredicted RBP8.24□□□□□ -1.09
PDPN-202ENST00000376057 NSUN5P1Q3KNT7 163 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 TP53TG3Q9ULZ0 132 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 NDUFA6P56556 154 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 DEFA6Q01524 100 aa8.24□□□□□ -1.09
PDPN-202ENST00000376057 PACRGQ96M98 296 aaPredicted RBP8.24□□□□□ -1.09
PDPN-202ENST00000376057 SPINK4O60575 86 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 RNASE4P34096 147 aaKnown RBP8.23□□□□□ -1.09
PDPN-202ENST00000376057 DEFB131AP59861 70 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 SLAQ13239 276 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 DEFB1P60022 68 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 U3KQK5 164 aa8.23□□□□□ -1.09
PDPN-202ENST00000376057 LOC102724200A0A096LPH7 203 aaPredicted RBP8.22□□□□□ -1.09
PDPN-202ENST00000376057 NXPH4O95158 308 aa8.22□□□□□ -1.09
PDPN-202ENST00000376057 HIST3H2BBQ8N257 126 aa8.22□□□□□ -1.09
PDPN-202ENST00000376057 FN1P02751 2386 aaKnown RBP8.22□□□□□ -1.09
PDPN-202ENST00000376057 SAP30O75446 220 aa8.22□□□□□ -1.09
PDPN-202ENST00000376057 RAB4BP61018 213 aa8.22□□□□□ -1.09
PDPN-202ENST00000376057 ODF3L2Q3SX64 289 aa8.22□□□□□ -1.09
PDPN-202ENST00000376057 ALKBH7Q9BT30 221 aaPredicted RBP8.22□□□□□ -1.09
PDPN-202ENST00000376057 WIPF1O43516 503 aa8.21□□□□□ -1.09
PDPN-202ENST00000376057 ASIPP42127 132 aa8.21□□□□□ -1.09
PDPN-202ENST00000376057 CAMPP49913 170 aa8.21□□□□□ -1.09
PDPN-202ENST00000376057 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.09
PDPN-202ENST00000376057 PF4P02776 101 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 ANXA2RQ3ZCQ2 193 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 GFI1BQ5VTD9 330 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 MCRIP2Q9BUT9 160 aaKnown RBP8.21□□□□□ -1.1
PDPN-202ENST00000376057 SELENOKQ9Y6D0 94 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 COTL1Q14019 142 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 FAM104BQ5XKR9 115 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 WFDC9Q8NEX5 89 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 PTH2Q96A98 100 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 ZNF747Q9BV97 191 aa8.21□□□□□ -1.1
PDPN-202ENST00000376057 OR11H12B2RN74 326 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 NTF3P20783 257 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 C9orf66Q5T8R8 295 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 FAM159AQ6UWV7 190 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 TRPT1Q86TN4 253 aaKnown RBP8.2□□□□□ -1.1
PDPN-202ENST00000376057 NF1P21359 2839 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 CRXO43186 299 aaPredicted RBP8.2□□□□□ -1.1
PDPN-202ENST00000376057 CD33P20138 364 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 LAMTOR2Q9Y2Q5 125 aa8.2□□□□□ -1.1
PDPN-202ENST00000376057 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 RBMY1BA6NDE4 496 aaKnown RBP8.19□□□□□ -1.1
PDPN-202ENST00000376057 RBMY1EA6NEQ0 496 aaKnown RBP8.19□□□□□ -1.1
PDPN-202ENST00000376057 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 PPBPP02775 128 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 RBMY1DP0C7P1 496 aaKnown RBP8.19□□□□□ -1.1
PDPN-202ENST00000376057 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
PDPN-202ENST00000376057 SRIP30626 198 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 TWIST1Q15672 202 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 Q6ZQT7 251 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
PDPN-202ENST00000376057 IGHV1OR15-1A0A075B7D0 117 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 G0S2P27469 103 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 KIR3DS1Q14943 382 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 MTORP42345 2549 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 TRGV11A0A075B6L2 103 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
PDPN-202ENST00000376057 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 IGHV3-16A0A0C4DH30 117 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 TMEM256Q8N2U0 113 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 NDUFAF3Q9BU61 184 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 LINC00310P59036 64 aa8.17□□□□□ -1.1
PDPN-202ENST00000376057 MORN3Q6PF18 240 aaPredicted RBP8.17□□□□□ -1.1
PDPN-202ENST00000376057 RNF185Q96GF1 192 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms