RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 ARL6IP6Q8N6S5 226 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 MSRB1Q9NZV6 116 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
H2AFX-201ENST00000375167 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
H2AFX-201ENST00000375167 HOXA5P20719 270 aa11.76□□□□□ -0.53
H2AFX-201ENST00000375167 KRTAP10-4P60372 401 aaPredicted RBP11.76□□□□□ -0.53
H2AFX-201ENST00000375167 RANP62826 216 aaKnown RBP11.76□□□□□ -0.53
H2AFX-201ENST00000375167 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
H2AFX-201ENST00000375167 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
H2AFX-201ENST00000375167 OTORQ9NRC9 128 aa11.76□□□□□ -0.53
H2AFX-201ENST00000375167 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
H2AFX-201ENST00000375167 K7EQM0 130 aa11.75□□□□□ -0.53
H2AFX-201ENST00000375167 IFNA7P01567 189 aa11.75□□□□□ -0.53
H2AFX-201ENST00000375167 Q6ZSA8 131 aa11.75□□□□□ -0.53
H2AFX-201ENST00000375167 TCEAL7Q9BRU2 100 aa11.75□□□□□ -0.53
H2AFX-201ENST00000375167 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
H2AFX-201ENST00000375167 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 IFNA1P01562 189 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 TAGLN2P37802 199 aaKnown RBP11.74□□□□□ -0.53
H2AFX-201ENST00000375167 CDKN1BP46527 198 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
H2AFX-201ENST00000375167 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 A0A096LPF7 62 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 TRAV1-1A0A0B4J248 108 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
H2AFX-201ENST00000375167 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
H2AFX-201ENST00000375167 F6UZH7 168 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 LEPP41159 167 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 FHITP49789 147 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 C9orf47Q6ZRZ4 202 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 C5orf17Q8NAS9 161 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 LINC01587Q99440 93 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
H2AFX-201ENST00000375167 RBAKDNA6NC62 111 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 PSCAO43653 123 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
H2AFX-201ENST00000375167 HTN1P15515 57 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 FGF8P55075 233 aaPredicted RBP11.71□□□□□ -0.53
H2AFX-201ENST00000375167 TAS2R60P59551 318 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 IFITM2Q01629 132 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 ERCC8Q13216 396 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 TMEM256Q8N2U0 113 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
H2AFX-201ENST00000375167 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
H2AFX-201ENST00000375167 PGPA6NDG6 321 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 RGS13O14921 159 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
H2AFX-201ENST00000375167 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 TEX261Q6UWH6 196 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 ZNF493Q6ZR52 646 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 Q8N814 137 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 VGLL1Q99990 258 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
H2AFX-201ENST00000375167 K7EP13 123 aa11.69□□□□□ -0.54
H2AFX-201ENST00000375167 TNXBP22105 4242 aa11.69□□□□□ -0.54
H2AFX-201ENST00000375167 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 RAB14P61106 215 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 SCXQ7RTU7 201 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 TMEM263Q8WUH6 116 aaKnown RBP11.68□□□□□ -0.54
H2AFX-201ENST00000375167 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
H2AFX-201ENST00000375167 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 H7BYZ3 331 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 GAGE7O76087 117 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 NMBP08949 121 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 ZNF138P52744 262 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 SUMO1P63165 101 aaKnown RBP11.67□□□□□ -0.54
H2AFX-201ENST00000375167 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
H2AFX-201ENST00000375167 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 ZNF492Q9P255 531 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 FAM74A7A6NL05 159 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 KLLNB2CW77 178 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 J3KRW8 73 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 CRISP2P16562 243 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 UBE2G2P60604 165 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 LENEPQ9Y5L5 61 aa11.67□□□□□ -0.54
H2AFX-201ENST00000375167 TRAV12-3A0A0B4J271 114 aa11.66□□□□□ -0.54
H2AFX-201ENST00000375167 A0A1B0GV50 99 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms