RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 GNRH2O43555 120 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 COX8AP10176 69 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 C2orf91Q6ZV80 131 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 COX8CQ7Z4L0 72 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 FOXC2Q99958 501 aa12.98□□□□□ -0.33
RXRB-201ENST00000374680 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 IGHV7-4-1A0A0J9YVY3 117 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 K7EMI3 77 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
RXRB-201ENST00000374680 RAB37Q96AX2 223 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 RHPN1-AS1Q9BWJ2 59 aa12.97□□□□□ -0.33
RXRB-201ENST00000374680 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 SMIM15Q7Z3B0 74 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 OR2K2Q8NGT1 345 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 DUX5Q96PT3 197 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 NPFFR1Q9GZQ6 430 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 MSMBP08118 114 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 MGPP08493 103 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 SPOCK3Q9BQ16 436 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
RXRB-201ENST00000374680 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 ORAOV1Q8WV07 137 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 U3KQE9 123 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 NF1P21359 2839 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 USP24Q9UPU5 2620 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 K7EP13 123 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
RXRB-201ENST00000374680 IGKV2D-26A0A0A0MRZ7 120 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 C12orf54Q6X4T0 127 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
RXRB-201ENST00000374680 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
RXRB-201ENST00000374680 LGALS9CQ6DKI2 356 aa12.93□□□□□ -0.34
RXRB-201ENST00000374680 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
RXRB-201ENST00000374680 SMIM17P0DL12 118 aa12.93□□□□□ -0.34
RXRB-201ENST00000374680 TMEM97Q5BJF2 176 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 PHLDA3Q9Y5J5 127 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 IGHG2P01859 326 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 FCER1GP30273 86 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 ZFAND2AQ8N6M9 145 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 TRAV8-6A0A0B4J262 113 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 A6NDX4 124 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 PPBPP02775 128 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
RXRB-201ENST00000374680 JPT2Q9H910 190 aa12.92□□□□□ -0.34
RXRB-201ENST00000374680 TGFAP01135 160 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 FGF6P10767 208 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 CNFNQ9BYD5 112 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 NDUFA4O00483 81 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 CD5LO43866 347 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
RXRB-201ENST00000374680 ZNF688P0C7X2 276 aa12.9□□□□□ -0.34
RXRB-201ENST00000374680 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
RXRB-201ENST00000374680 NXT2Q9NPJ8 142 aaKnown RBP12.9□□□□□ -0.34
RXRB-201ENST00000374680 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
RXRB-201ENST00000374680 TRAV12-2A0A075B6T6 113 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 ZC2HC1BQ5TFG8 222 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 NRACQ8N912 160 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
RXRB-201ENST00000374680 ODF1Q14990 250 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 C21orf62-AS1Q17RA5 79 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 PRRC2AP48634 2157 aaKnown RBP12.89□□□□□ -0.35
RXRB-201ENST00000374680 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 Q8N8P6 123 aa12.89□□□□□ -0.35
RXRB-201ENST00000374680 ACANP16112 2415 aa12.88□□□□□ -0.35
RXRB-201ENST00000374680 HTN1P15515 57 aa12.88□□□□□ -0.35
RXRB-201ENST00000374680 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
RXRB-201ENST00000374680 MUC4Q99102 2169 aa12.88□□□□□ -0.35
RXRB-201ENST00000374680 A0A087WWL8 130 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 GCSHP23434 173 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 LAGE3Q14657 143 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 B4DSR2 109 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 ASIPP42127 132 aa12.87□□□□□ -0.35
RXRB-201ENST00000374680 H3BUT2 72 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 PCP4P48539 62 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 SRSF2Q01130 221 aaKnown RBP12.86□□□□□ -0.35
RXRB-201ENST00000374680 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
RXRB-201ENST00000374680 MTORP42345 2549 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms