RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 SAMD10Q9BYL1 202 aa12.62□□□□□ -0.39
PTPN20-203ENST00000374342 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
PTPN20-203ENST00000374342 NTF3P20783 257 aa12.62□□□□□ -0.39
PTPN20-203ENST00000374342 PMCHP20382 165 aa12.61□□□□□ -0.39
PTPN20-203ENST00000374342 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
PTPN20-203ENST00000374342 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
PTPN20-203ENST00000374342 KLLNB2CW77 178 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 H3BVH4 76 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 RNASEKQ6P5S7 137 aaKnown RBP12.6□□□□□ -0.39
PTPN20-203ENST00000374342 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 LEPP41159 167 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 CDPF1Q6NVV7 123 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-203ENST00000374342 AGRNO00468 2067 aa12.6□□□□□ -0.39
PTPN20-203ENST00000374342 TCF21O43680 179 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 AMTP48728 403 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 PROK1P58294 105 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 FAM104BQ5XKR9 115 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 ODF3Q96PU9 254 aa12.59□□□□□ -0.39
PTPN20-203ENST00000374342 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.39
PTPN20-203ENST00000374342 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.39
PTPN20-203ENST00000374342 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.39
PTPN20-203ENST00000374342 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.39
PTPN20-203ENST00000374342 PCP4L1A6NKN8 68 aa12.58□□□□□ -0.4
PTPN20-203ENST00000374342 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-203ENST00000374342 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
PTPN20-203ENST00000374342 FOSL1P15407 271 aa12.58□□□□□ -0.4
PTPN20-203ENST00000374342 DEFB131AP59861 70 aa12.58□□□□□ -0.4
PTPN20-203ENST00000374342 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-203ENST00000374342 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 C7orf71A4D174 169 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 KNCNA6PVL3 124 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 D6R8Y8 96 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 M0R2Z0 102 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 ASIPP42127 132 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
PTPN20-203ENST00000374342 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
PTPN20-203ENST00000374342 SNAI2O43623 268 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 HSBP1O75506 76 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-203ENST00000374342 SPINK13Q1W4C9 94 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 MRPL51Q4U2R6 128 aaKnown RBP12.56□□□□□ -0.4
PTPN20-203ENST00000374342 FAM19A2Q8N3H0 131 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 SETD2Q9BYW2 2564 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-203ENST00000374342 TRAV12-2A0A075B6T6 113 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 S100A4P26447 101 aaKnown RBP12.56□□□□□ -0.4
PTPN20-203ENST00000374342 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 Q6ZWC4 215 aa12.56□□□□□ -0.4
PTPN20-203ENST00000374342 ADARB2-AS1A8MUL3 147 aa12.55□□□□□ -0.4
PTPN20-203ENST00000374342 CACNG7P62955 275 aa12.55□□□□□ -0.4
PTPN20-203ENST00000374342 NIT1Q86X76 327 aa12.55□□□□□ -0.4
PTPN20-203ENST00000374342 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
PTPN20-203ENST00000374342 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
PTPN20-203ENST00000374342 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 TSPOP30536 169 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 CDKN1BP46527 198 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 ZNF124Q15973 351 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-203ENST00000374342 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 GNRH2O43555 120 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 NCR2O95944 276 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
PTPN20-203ENST00000374342 SORL1Q92673 2214 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 SPRY2O43597 315 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 RNF185Q96GF1 192 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 U3KQK5 164 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
PTPN20-203ENST00000374342 CKS2P33552 79 aa12.52□□□□□ -0.4
PTPN20-203ENST00000374342 FXYD7P58549 80 aa12.52□□□□□ -0.4
PTPN20-203ENST00000374342 KRTAP10-3P60369 221 aa12.52□□□□□ -0.4
PTPN20-203ENST00000374342 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.4
PTPN20-203ENST00000374342 FN1P02751 2386 aaKnown RBP12.52□□□□□ -0.41
PTPN20-203ENST00000374342 TRAV25A0A0B4J276 109 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 M0R381 172 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 CRLF1O75462 422 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 EVI2AP22794 236 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
PTPN20-203ENST00000374342 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
PTPN20-203ENST00000374342 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 SAP30O75446 220 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 SCGB1D1O95968 90 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 RAB4AP20338 218 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
PTPN20-203ENST00000374342 ZNF256Q9Y2P7 627 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-203ENST00000374342 H3BMM0 161 aa12.5□□□□□ -0.41
PTPN20-203ENST00000374342 CD7P09564 240 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms