RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
LDB3-203ENST00000372056 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 SLURP1P55000 103 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
LDB3-203ENST00000372056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.74□□□□□ -0.85
LDB3-203ENST00000372056 FER1L6-AS1Q8NA97 138 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 DLX4Q92988 240 aaPredicted RBP9.74□□□□□ -0.85
LDB3-203ENST00000372056 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 C20orf144Q9BQM9 153 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 NSD1Q96L73 2696 aaPredicted RBP9.74□□□□□ -0.85
LDB3-203ENST00000372056 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 DYNLRB2Q8TF09 96 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 C11orf21Q9P2W6 132 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 F8P00451 2351 aa9.74□□□□□ -0.85
LDB3-203ENST00000372056 FN1P02751 2386 aaKnown RBP9.73□□□□□ -0.85
LDB3-203ENST00000372056 DEFB1P60022 68 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 GAGE1Q13065 139 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 DEFB136Q30KP8 78 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 OR8A1Q8NGG7 326 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 CITED1Q99966 193 aa9.73□□□□□ -0.85
LDB3-203ENST00000372056 IGKV3D-20A0A0C4DH25 116 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 A0A1W2PRX2 142 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 PF4P02776 101 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 GPX1P07203 203 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 CSN3P07498 182 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 INSL3P51460 131 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 PRR9Q5T870 116 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 C11orf44Q8N8P7 122 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 MS4A6AQ9H2W1 248 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 F6UB75 175 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 Q6ZWC4 215 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
LDB3-203ENST00000372056 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
LDB3-203ENST00000372056 CYSRT1A8MQ03 144 aa9.71□□□□□ -0.85
LDB3-203ENST00000372056 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.85
LDB3-203ENST00000372056 ZNF324O75467 553 aaPredicted RBP9.71□□□□□ -0.85
LDB3-203ENST00000372056 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.85
LDB3-203ENST00000372056 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.85
LDB3-203ENST00000372056 MCRIP2Q9BUT9 160 aaKnown RBP9.71□□□□□ -0.85
LDB3-203ENST00000372056 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.86
LDB3-203ENST00000372056 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.86
LDB3-203ENST00000372056 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 DEFB114Q30KQ6 69 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 MUC21Q5SSG8 566 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 Q6ZQT7 251 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 K7EQG2 157 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 AMTP48728 403 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 ADAMTSL5Q6ZMM2 481 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 WFDC3Q8IUB2 231 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 ZNF747Q9BV97 191 aa9.7□□□□□ -0.86
LDB3-203ENST00000372056 DLEU1O43261 78 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 ZNF25P17030 456 aaPredicted RBP9.69□□□□□ -0.86
LDB3-203ENST00000372056 PMCHP20382 165 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 NTF3P20783 257 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 G0S2P27469 103 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 TWIST1Q15672 202 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 FAM104BQ5XKR9 115 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
LDB3-203ENST00000372056 DUSP14O95147 198 aaKnown RBP9.68□□□□□ -0.86
LDB3-203ENST00000372056 TFPI2P48307 235 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 TRAV21A0A0B4J279 112 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 J3KRW8 73 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 LINC00614P0C842 121 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 CD33P20138 364 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 PSMG4Q5JS54 123 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 RNASEKQ6P5S7 137 aaKnown RBP9.68□□□□□ -0.86
LDB3-203ENST00000372056 NIT1Q86X76 327 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
LDB3-203ENST00000372056 HSBP1O75506 76 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 KRTAP10-3P60369 221 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 EBLN2Q6P2I7 272 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 ZNF705AQ6ZN79 300 aaPredicted RBP9.67□□□□□ -0.86
LDB3-203ENST00000372056 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 TMEM191AQ9H0A3 160 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 U3KQK5 164 aa9.67□□□□□ -0.86
LDB3-203ENST00000372056 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
LDB3-203ENST00000372056 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
LDB3-203ENST00000372056 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms