RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HTN1P15515 57 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 COL5A1-AS1Q5SY13 56 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 C11orf44Q8N8P7 122 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 RHPN1-AS1Q9BWJ2 59 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 NPFFR1Q9GZQ6 430 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 IGKV3D-20A0A0C4DH25 116 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 PRR9Q5T870 116 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 DUX3Q96PT4 197 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 UQCR10Q9UDW1 63 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
PDE6C-201ENST00000371447 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
PDE6C-201ENST00000371447 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
PDE6C-201ENST00000371447 RAB9AP51151 201 aa8.97□□□□□ -0.97
PDE6C-201ENST00000371447 KLHDC1Q8N7A1 406 aa8.97□□□□□ -0.97
PDE6C-201ENST00000371447 STPG4Q8N801 248 aa8.97□□□□□ -0.97
PDE6C-201ENST00000371447 SLC50A1Q9BRV3 221 aa8.97□□□□□ -0.97
PDE6C-201ENST00000371447 ZNF688P0C7X2 276 aa8.96□□□□□ -0.97
PDE6C-201ENST00000371447 DEFB136Q30KP8 78 aa8.96□□□□□ -0.97
PDE6C-201ENST00000371447 CHCHD1Q96BP2 118 aaKnown RBP8.96□□□□□ -0.97
PDE6C-201ENST00000371447 A6NDX4 124 aa8.96□□□□□ -0.98
PDE6C-201ENST00000371447 CACNG7P62955 275 aa8.96□□□□□ -0.98
PDE6C-201ENST00000371447 MEGF9Q9H1U4 602 aa8.96□□□□□ -0.98
PDE6C-201ENST00000371447 CTRLP40313 264 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 TMEM191AQ9H0A3 160 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 IGHG2P01859 326 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 MGPP08493 103 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 LAMTOR2Q9Y2Q5 125 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 A0A1B0GW15 77 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 FAM223BA6NKX1 122 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 GNRH2O43555 120 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 TSPOP30536 169 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 SYNJ2BPP57105 145 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 Q6AWC8 147 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 FAM223AQ8IWN6 122 aa8.95□□□□□ -0.98
PDE6C-201ENST00000371447 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 TRAV26-1A0A087WT03 109 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 A0A1B0GV72 72 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 PPBPP02775 128 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 OCIAD2Q56VL3 154 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 ZNF469Q96JG9 3925 aaPredicted RBP8.94□□□□□ -0.98
PDE6C-201ENST00000371447 TRAV12-2A0A075B6T6 113 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 CRYBA4P53673 196 aa8.94□□□□□ -0.98
PDE6C-201ENST00000371447 TRBV6-1A0A0K0K1D8 114 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 PRSS1P07477 247 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 SRSF1Q07955 248 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDE6C-201ENST00000371447 SAMD13Q5VXD3 122 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 A0A087X0K7 114 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 K7ERU9 68 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 LEPP41159 167 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 ZNF575Q86XF7 245 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 C14orf178Q8N769 122 aaPredicted RBP8.93□□□□□ -0.98
PDE6C-201ENST00000371447 GPHB5Q86YW7 130 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 LINC01356Q8N9X3 169 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
PDE6C-201ENST00000371447 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 HOXA3O43365 443 aaPredicted RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 UBE2V1Q13404 147 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 MPV17L2Q567V2 206 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 FBLL1A6NHQ2 334 aaKnown RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 NUDT3O95989 172 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 IGLC6P0CF74 106 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 NMUP48645 174 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 RPS20P60866 119 aaKnown RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 NEGR1Q7Z3B1 354 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 HIVEP2P31629 2446 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 TRAV12-3A0A0B4J271 114 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 NDUFA4O00483 81 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 C18orf65Q6ZTR6 163 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 Q96MF0 132 aa8.92□□□□□ -0.98
PDE6C-201ENST00000371447 PEF1Q9UBV8 284 aaKnown RBP8.92□□□□□ -0.98
PDE6C-201ENST00000371447 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 MAP1LC3AQ9H492 121 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 DAZ1Q9NQZ3 744 aaKnown RBP8.91□□□□□ -0.98
PDE6C-201ENST00000371447 DKK2Q9UBU2 259 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 PHLDA3Q9Y5J5 127 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 A0A096LNJ9 63 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 K7EP13 123 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 HERV-K104P63124 156 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 RNF185Q96GF1 192 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 TENM4Q6N022 2769 aa8.91□□□□□ -0.98
PDE6C-201ENST00000371447 FAM74A4Q5TZK3 123 aa8.9□□□□□ -0.98
PDE6C-201ENST00000371447 JPT2Q9H910 190 aa8.9□□□□□ -0.98
PDE6C-201ENST00000371447 SMAGPQ0VAQ4 97 aa8.9□□□□□ -0.98
PDE6C-201ENST00000371447 C9orf139Q6ZV77 190 aa8.9□□□□□ -0.98
PDE6C-201ENST00000371447 USMG5Q96IX5 58 aa8.9□□□□□ -0.98
PDE6C-201ENST00000371447 IGHV7-4-1A0A0J9YVY3 117 aa8.9□□□□□ -0.99
PDE6C-201ENST00000371447 A0A1W2PRX2 142 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms