RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
SSBP3-203ENST00000371319 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.33
SSBP3-203ENST00000371319 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
SSBP3-203ENST00000371319 HIST1H2BLQ99880 126 aa13.02□□□□□ -0.33
SSBP3-203ENST00000371319 MAP6D1Q9H9H5 199 aa13.02□□□□□ -0.33
SSBP3-203ENST00000371319 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-203ENST00000371319 NSD1Q96L73 2696 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-203ENST00000371319 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-203ENST00000371319 A8MTW9 85 aa13.01□□□□□ -0.33
SSBP3-203ENST00000371319 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
SSBP3-203ENST00000371319 ANXA2RQ3ZCQ2 193 aa13.01□□□□□ -0.33
SSBP3-203ENST00000371319 NAGKQ9UJ70 344 aa13.01□□□□□ -0.33
SSBP3-203ENST00000371319 OR4C46A6NHA9 309 aa13□□□□□ -0.33
SSBP3-203ENST00000371319 AMBPP02760 352 aa13□□□□□ -0.33
SSBP3-203ENST00000371319 S100A2P29034 98 aa13□□□□□ -0.33
SSBP3-203ENST00000371319 SSTP61278 116 aa13□□□□□ -0.33
SSBP3-203ENST00000371319 C7orf71A4D174 169 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 SNAI2O43623 268 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 SERF1AO75920 110 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 ESDP10768 282 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 HLA-DRB4P13762 266 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 FABP4P15090 132 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 NTF3P20783 257 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 TWIST1Q15672 202 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 ZNF124Q15973 351 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 BAGE3Q86Y29 109 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-203ENST00000371319 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 HLA-DRB4X5D2U9 266 aa12.99□□□□□ -0.33
SSBP3-203ENST00000371319 ZNF324O75467 553 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-203ENST00000371319 OR5AL1P0C617 328 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 IQCJQ1A5X6 159 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 LINC00518Q8N0U6 118 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 AGRNO00468 2067 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 RBMY1BA6NDE4 496 aaKnown RBP12.98□□□□□ -0.33
SSBP3-203ENST00000371319 RBMY1EA6NEQ0 496 aaKnown RBP12.98□□□□□ -0.33
SSBP3-203ENST00000371319 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 H3BMM0 161 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 M0R2Z0 102 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 RBMY1DP0C7P1 496 aaKnown RBP12.98□□□□□ -0.33
SSBP3-203ENST00000371319 DNLZQ5SXM8 178 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
SSBP3-203ENST00000371319 SETXQ7Z333 2677 aaKnown RBP12.97□□□□□ -0.33
SSBP3-203ENST00000371319 TRAV12-2A0A075B6T6 113 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 H3BVH4 76 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 TSPOP30536 169 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 CDKN1BP46527 198 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 OR10D4PQ8NGN7 298 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
SSBP3-203ENST00000371319 IGHV4-4A0A075B6R2 117 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 GNRH2O43555 120 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 SAP30O75446 220 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 ASIPP42127 132 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 ODF3L2Q3SX64 289 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
SSBP3-203ENST00000371319 IGLV1-51P01701 117 aa12.95□□□□□ -0.34
SSBP3-203ENST00000371319 CACNG7P62955 275 aa12.95□□□□□ -0.34
SSBP3-203ENST00000371319 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
SSBP3-203ENST00000371319 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-203ENST00000371319 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
SSBP3-203ENST00000371319 U3KQK5 164 aa12.95□□□□□ -0.34
SSBP3-203ENST00000371319 LINC00482Q8N8I6 264 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 TMEM18Q96B42 140 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
SSBP3-203ENST00000371319 FXYD7P58549 80 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
SSBP3-203ENST00000371319 OR2K2Q8NGT1 345 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
SSBP3-203ENST00000371319 CRXO43186 299 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-203ENST00000371319 SMIM6P0DI80 62 aa12.93□□□□□ -0.34
SSBP3-203ENST00000371319 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
SSBP3-203ENST00000371319 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
SSBP3-203ENST00000371319 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
SSBP3-203ENST00000371319 KCNS1Q96KK3 526 aa12.93□□□□□ -0.34
SSBP3-203ENST00000371319 TIMM8BQ9Y5J9 83 aaPredicted RBP12.93□□□□□ -0.34
SSBP3-203ENST00000371319 SPRY2O43597 315 aa12.92□□□□□ -0.34
SSBP3-203ENST00000371319 PF4P02776 101 aa12.92□□□□□ -0.34
SSBP3-203ENST00000371319 S100A4P26447 101 aaKnown RBP12.92□□□□□ -0.34
SSBP3-203ENST00000371319 SORL1Q92673 2214 aa12.92□□□□□ -0.34
SSBP3-203ENST00000371319 RBMY1A1P0DJD3 496 aaKnown RBP12.91□□□□□ -0.34
SSBP3-203ENST00000371319 RBMY1CP0DJD4 496 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 RBMY1FQ15415 496 aaKnown RBP12.91□□□□□ -0.34
SSBP3-203ENST00000371319 SPANXN1Q5VSR9 72 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 C12orf57Q99622 126 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 CITED1Q99966 193 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 WNK1Q9H4A3 2382 aa12.91□□□□□ -0.34
SSBP3-203ENST00000371319 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
SSBP3-203ENST00000371319 D6R8Y8 96 aa12.9□□□□□ -0.34
SSBP3-203ENST00000371319 RAB4AP20338 218 aa12.9□□□□□ -0.34
SSBP3-203ENST00000371319 C2CD3Q4AC94 2353 aa12.9□□□□□ -0.34
SSBP3-203ENST00000371319 OR11H12B2RN74 326 aa12.9□□□□□ -0.35
SSBP3-203ENST00000371319 BEAN1Q3B7T3 259 aa12.9□□□□□ -0.35
SSBP3-203ENST00000371319 PYY3Q5JQD4 70 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms