RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CACNA1CQ13936 2221 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGF2RP11717 2491 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGHV3OR16-12A0A075B7B8 117 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGLV5-52A0A0A0MRZ9 124 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 TRAV8-2A0A0B4J237 113 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 CTXND1A0A1B0GTU2 59 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 CLPSL1A2RUU4 121 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 FAM24AA6NFZ4 105 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 A8MUN3 132 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 M0R2P5 195 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 CXCL1P09341 107 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGLL1P15814 213 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 NPPCP23582 126 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 NDUFV3P56181 108 aaKnown RBP2.85□□□□□ -1.95
MCF2-203ENST00000370576 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 LYPD1Q8N2G4 141 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 NKAPP1Q8N9T2 125 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 SGMS2Q8NHU3 365 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 ANAPC13Q9BS18 74 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 PSENENQ9NZ42 101 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
MCF2-203ENST00000370576 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV7-81A0A0B4J1V7 117 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV3-38A0A0C4DH36 116 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 TCRBV4S1A1TA0A5B7 111 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 H3BRN7 92 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 LY6G6DO95868 133 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGLV2-11P01706 119 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 CCL3L1P16619 93 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IL3RAP26951 378 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 RHEBQ15382 184 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 ACACAQ13085 2346 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 CUBNO60494 3623 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 APC2O95996 2303 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV1-69DA0A0B4J2H0 117 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV4-61A0A0C4DH41 118 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 C1orf196B1AJZ1 125 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 KRASP01116 189 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV1-69P01742 117 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 IGHV4-59P01825 116 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 RNASE1P07998 156 aaKnown RBP2.84□□□□□ -1.95
MCF2-203ENST00000370576 SCGB1D4Q6XE38 83 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 Q6YL49 198 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 VMO1Q7Z5L0 202 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 PRNTQ86SH4 94 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 METTL26Q96S19 204 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 NPVFQ9HCQ7 196 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 DPM3Q9P2X0 92 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 MGAQ8IWI9 3026 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 CEP295Q9C0D2 2601 aa2.84□□□□□ -1.95
MCF2-203ENST00000370576 RBAKDNA6NC62 111 aa2.84□□□□□ -1.96
MCF2-203ENST00000370576 LGALS9O00182 355 aa2.84□□□□□ -1.96
MCF2-203ENST00000370576 TMEM75Q8N9X5 138 aa2.84□□□□□ -1.96
MCF2-203ENST00000370576 OR5C1Q8NGR4 320 aa2.84□□□□□ -1.96
MCF2-203ENST00000370576 CNFNQ9BYD5 112 aa2.84□□□□□ -1.96
MCF2-203ENST00000370576 ANKRD17O75179 2603 aaKnown RBP2.84□□□□□ -1.96
MCF2-203ENST00000370576 TRBV24-1A0A075B6N3 115 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FAM236AA0A1B0GUQ0 79 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FAM236BA0A1B0GV22 79 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 M0R378 163 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 CCL20P78556 96 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 CCL8P80075 99 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 PDE6HQ13956 83 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 CYP2G1PQ6ZSU1 146 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 C1QTNF6Q9BXI9 259 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 PLEKHA3Q9HB20 300 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 MSRB1Q9NZV6 116 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 MRPL36Q9P0J6 103 aaKnown RBP2.83□□□□□ -1.96
MCF2-203ENST00000370576 ZNF492Q9P255 531 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 PTPRQQ9UMZ3 2332 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FAM223BA6NKX1 122 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 KNCNA6PVL3 124 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 LST1O00453 97 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 TAX1BP3O14907 124 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 SSSCA1O60232 199 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 LINC00205P59089 165 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 MMDQ15546 238 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 ECSCRQ19T08 205 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FAM223AQ8IWN6 122 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 SDF2L1Q9HCN8 221 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 NDUFS5O43920 106 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 IGKV1-17P01599 117 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 IGHV4-38-2P0DP08 117 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 NDPQ00604 133 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 OR2T10Q8NGZ9 312 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 TMEM191AQ9H0A3 160 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FUT9Q9Y231 359 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 KLK5Q9Y337 293 aaPredicted RBP2.83□□□□□ -1.96
MCF2-203ENST00000370576 KNL1Q8NG31 2342 aa2.83□□□□□ -1.96
MCF2-203ENST00000370576 FXYD6-FXYD2A0A087WZ82 144 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 M0R1X1 148 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 FXYD4P59646 89 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 PGLYRP4Q96LB8 373 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 ODF3Q96PU9 254 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms