RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 CCL21O00585 134 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 IGHV1-2P23083 117 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
LCA5-201ENST00000369846 TRPT1Q86TN4 253 aaKnown RBP6.86□□□□□ -1.31
LCA5-201ENST00000369846 ZNF524Q96C55 264 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 TRGV1A0A0A0MS02 117 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 UQCRQO14949 82 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 WISP1O95388 367 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 CFHR1Q03591 330 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 Q6ZS49 121 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 C9orf139Q6ZV77 190 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 RHODO00212 210 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 CRYGCP07315 174 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 PRR25Q96S07 402 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 CDK2AP2O75956 126 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 DKK1O94907 266 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 SPANXB1Q9NS25 103 aaPredicted RBP6.85□□□□□ -1.31
LCA5-201ENST00000369846 IGHV1OR15-1A0A075B7D0 117 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 SRRM5B3KS81 715 aa6.85□□□□□ -1.31
LCA5-201ENST00000369846 C17orf100A8MU93 164 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 E9PLN8 166 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 LMO1P25800 156 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 Q6P435 159 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 PCNX3Q9H6A9 2034 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 LYNX1G3V0Z9 82 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 LYNX1P0DP58 116 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 TRIP6Q15654 476 aaKnown RBP6.84□□□□□ -1.31
LCA5-201ENST00000369846 ATP1A1-AS1Q5TC04 95 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 CD177Q8N6Q3 437 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 CFPP27918 469 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 PDE6HQ13956 83 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 STHQ8IWL8 128 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 HIGD1BQ9P298 99 aa6.84□□□□□ -1.31
LCA5-201ENST00000369846 CCDC179H3BU77 68 aa6.84□□□□□ -1.32
LCA5-201ENST00000369846 Q8N1Y9 231 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 BAALCQ8WXS3 180 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 ZNRD1Q9P1U0 126 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 B9A039 149 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 CSRP1P21291 193 aaKnown RBP6.83□□□□□ -1.32
LCA5-201ENST00000369846 RNF152Q8N8N0 203 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 TRBV10-2A0A0K0K1G8 114 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 IGLC6P0CF74 106 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 C10orf105Q8TEF2 133 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 ICOSQ9Y6W8 199 aa6.83□□□□□ -1.32
LCA5-201ENST00000369846 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 CLEC2BQ92478 149 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 SIGLEC9Q9Y336 463 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 C1orf195Q5TG92 126 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 SMRP1Q8NCR6 262 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 IGHV3-16A0A0C4DH30 117 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 LINC01560Q8TB33 94 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 TRANK1O15050 2925 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 SPRY2O43597 315 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 HRCT1Q6UXD1 115 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 SPATA25Q9BR10 227 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 ORMDL1Q9P0S3 153 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 COL6A3P12111 3177 aa6.82□□□□□ -1.32
LCA5-201ENST00000369846 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 I3L3M4 83 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 ATP5J2P56134 94 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 LOXL1Q08397 574 aaPredicted RBP6.81□□□□□ -1.32
LCA5-201ENST00000369846 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 FXYD5Q96DB9 178 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 TCL1BO95988 128 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 Q9H8V8 135 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 TMEM14BQ9NUH8 114 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 TEX49A0A1B0GTD5 131 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 H3BT86 120 aa6.81□□□□□ -1.32
LCA5-201ENST00000369846 EML6Q6ZMW3 1958 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 PRR20EP86478 221 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 PRR20CP86479 221 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 PRR20DP86480 221 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 PRR20BP86481 221 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 PRR20AP86496 221 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 BSPH1Q075Z2 132 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 C3orf22Q8N5N4 141 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 FDCSPQ8NFU4 85 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 UBE2E2Q96LR5 201 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 DAND5Q8N907 189 aa6.8□□□□□ -1.32
LCA5-201ENST00000369846 CFHR4Q92496 578 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms