RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 FBXL15Q9H469 300 aa11.77□□□□□ -0.52
PHTF1-202ENST00000369598 SPG11Q96JI7 2443 aa11.77□□□□□ -0.52
PHTF1-202ENST00000369598 UTP20O75691 2785 aaKnown RBP11.77□□□□□ -0.53
PHTF1-202ENST00000369598 H7C2G1 150 aa11.77□□□□□ -0.53
PHTF1-202ENST00000369598 CRYGBP07316 175 aa11.77□□□□□ -0.53
PHTF1-202ENST00000369598 COX6B1P14854 86 aa11.77□□□□□ -0.53
PHTF1-202ENST00000369598 MRGPRG-AS1Q2M3A8 158 aa11.77□□□□□ -0.53
PHTF1-202ENST00000369598 INS-IGF2F8WCM5 200 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 HOXB4P17483 251 aaPredicted RBP11.76□□□□□ -0.53
PHTF1-202ENST00000369598 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHTF1-202ENST00000369598 HES1Q14469 280 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
PHTF1-202ENST00000369598 THAP8Q8NA92 274 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 MAP1LC3AQ9H492 121 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 DPM2O94777 84 aa11.76□□□□□ -0.53
PHTF1-202ENST00000369598 SMCPP49901 116 aaPredicted RBP11.76□□□□□ -0.53
PHTF1-202ENST00000369598 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 MINOS1Q5TGZ0 78 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 Q6ZUT4 128 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 CFHR4Q92496 578 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 MINOS1-NBL1R4GNA1 71 aa11.75□□□□□ -0.53
PHTF1-202ENST00000369598 TRBV19A0A075B6N1 114 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
PHTF1-202ENST00000369598 SCGB1D4Q6XE38 83 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 DPF1Q92782 380 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 Q6ZQT7 251 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 NRGNQ92686 78 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
PHTF1-202ENST00000369598 UBE2E1P51965 193 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 ERCC8Q13216 396 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 CRYBG3Q68DQ2 2970 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 IGHV4-61A0A0C4DH41 118 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 OOSP1A8MZH6 123 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 DYNAPQ8N1N2 210 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 NBR2O15453 112 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 TRGV3P03979 118 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
PHTF1-202ENST00000369598 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
PHTF1-202ENST00000369598 HERV-K104P63124 156 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 IGKV1-17P01599 117 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 TRGV9Q99603 122 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
PHTF1-202ENST00000369598 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
PHTF1-202ENST00000369598 IGHV4-30-2A0A087WSY4 118 aa11.71□□□□□ -0.53
PHTF1-202ENST00000369598 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
PHTF1-202ENST00000369598 CREBBPQ92793 2442 aa11.71□□□□□ -0.53
PHTF1-202ENST00000369598 NCBP2LA6PVI3 153 aaKnown RBP11.71□□□□□ -0.54
PHTF1-202ENST00000369598 SCGB1C2P0DMR2 95 aa11.71□□□□□ -0.54
PHTF1-202ENST00000369598 PAX8Q06710 450 aa11.71□□□□□ -0.54
PHTF1-202ENST00000369598 MORN3Q6PF18 240 aaPredicted RBP11.71□□□□□ -0.54
PHTF1-202ENST00000369598 NPBQ8NG41 125 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 AAMDCQ9H7C9 122 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 C1QTNF4Q9BXJ3 329 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 CELSR1Q9NYQ6 3014 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
PHTF1-202ENST00000369598 SAA4P35542 130 aa11.69□□□□□ -0.54
PHTF1-202ENST00000369598 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
PHTF1-202ENST00000369598 TEX22C9J3V5 150 aa11.69□□□□□ -0.54
PHTF1-202ENST00000369598 ZNF493Q6ZR52 646 aa11.69□□□□□ -0.54
PHTF1-202ENST00000369598 OR11H12B2RN74 326 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 C5orf64Q2M2E5 130 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 RNF182Q8N6D2 247 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 RNF185Q96GF1 192 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 RAX2Q96IS3 184 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 DSCR9P59020 149 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 HIGD1BQ9P298 99 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 CENPVL3A0A0U1RRI6 287 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 NPFFO15130 113 aa11.68□□□□□ -0.54
PHTF1-202ENST00000369598 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
PHTF1-202ENST00000369598 SORL1Q92673 2214 aa11.67□□□□□ -0.54
PHTF1-202ENST00000369598 EBI3Q14213 229 aa11.67□□□□□ -0.54
PHTF1-202ENST00000369598 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
PHTF1-202ENST00000369598 ZFHX3Q15911 3703 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 TEX29Q8N6K0 151 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 DLX4Q92988 240 aaPredicted RBP11.66□□□□□ -0.54
PHTF1-202ENST00000369598 ERG28Q9UKR5 140 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 U3KQK5 164 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 ZNF815PA8K554 130 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 AJUBAQ96IF1 538 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 PRR25Q96S07 402 aa11.66□□□□□ -0.54
PHTF1-202ENST00000369598 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 CRYGCP07315 174 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 ARL3P36405 182 aa11.65□□□□□ -0.54
PHTF1-202ENST00000369598 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms