RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 ZMAT4Q9H898 229 aa9.65□□□□□ -0.87
SHC1-203ENST00000368449 IGLV2-18A0A075B6J9 118 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 C1orf122Q6ZSJ8 110 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 FAM110DQ8TAY7 271 aaPredicted RBP9.64□□□□□ -0.87
SHC1-203ENST00000368449 VPS13CQ709C8 3753 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 GEMIN7Q9H840 131 aaKnown RBP9.64□□□□□ -0.87
SHC1-203ENST00000368449 MINOS1-NBL1R4GNA1 71 aa9.64□□□□□ -0.87
SHC1-203ENST00000368449 IGKCP01834 107 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 C12orf74Q32Q52 190 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 PIFOQ8TCI5 191 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 OOSP1A8MZH6 123 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 FOXC2Q99958 501 aa9.63□□□□□ -0.87
SHC1-203ENST00000368449 SPRY2O43597 315 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
SHC1-203ENST00000368449 TMEM160Q9NX00 188 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 HIVEP3Q5T1R4 2406 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 TMEM8BA6NDV4 472 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 IGF1P05019 195 aa9.62□□□□□ -0.87
SHC1-203ENST00000368449 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 A0A1B0GWB2 263 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 SCGB2A1O75556 95 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 SAA4P35542 130 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 NRACQ8N912 160 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 PRR9Q5T870 116 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 Q8N8P6 123 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
SHC1-203ENST00000368449 LINC00527Q9UJ94 153 aa9.61□□□□□ -0.87
SHC1-203ENST00000368449 CHD8Q9HCK8 2581 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 SLC50A1Q9BRV3 221 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 APOMO95445 188 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
SHC1-203ENST00000368449 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
SHC1-203ENST00000368449 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
SHC1-203ENST00000368449 DPM2O94777 84 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 GATA3P23771 443 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 EFNA4P52798 201 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 DEFB1P60022 68 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 HIST1H4GQ99525 98 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 MRPL16Q9NX20 251 aaKnown RBP9.59□□□□□ -0.87
SHC1-203ENST00000368449 NCOR2Q9Y618 2525 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 J3KRW8 73 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 UBE2E1P51965 193 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 FHL3Q13643 280 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 RRN3P1Q2M238 152 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 KLK9Q2XQG4 91 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 TMEM78Q5T7P6 136 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 KLK9Q9UKQ9 250 aa9.59□□□□□ -0.87
SHC1-203ENST00000368449 TMEM219Q86XT9 240 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 C20orf173Q96LM9 149 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 CENPVL3A0A0U1RRI6 287 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 H3BVH4 76 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 SRSF1Q07955 248 aaKnown RBP eCLIP9.58□□□□□ -0.889e-9■■■□□ 14.8
SHC1-203ENST00000368449 FOXI1Q12951 378 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 NFE4Q86UQ8 179 aa9.58□□□□□ -0.88
SHC1-203ENST00000368449 GLMPQ8WWB7 406 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 METTL26Q96S19 204 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 U3KQE9 123 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
SHC1-203ENST00000368449 C9orf47Q6ZRZ4 202 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 IGHV3OR16-10A0A075B7F0 116 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 LAGE3Q14657 143 aa9.57□□□□□ -0.88
SHC1-203ENST00000368449 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 ATP5LO75964 103 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 XGP55808 180 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 LMO4P61968 165 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 MORN3Q6PF18 240 aaPredicted RBP9.56□□□□□ -0.88
SHC1-203ENST00000368449 ZNF418Q8TF45 676 aaPredicted RBP9.56□□□□□ -0.88
SHC1-203ENST00000368449 PTH2Q96A98 100 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 RAXQ9Y2V3 346 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
SHC1-203ENST00000368449 UNQ9165/PRO28630Q6UXU0 137 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 BPESC1Q9GZL8 116 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 PSMG4Q5JS54 123 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 C16orf92Q96LL3 132 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 KLK15Q9H2R5 256 aa9.55□□□□□ -0.88
SHC1-203ENST00000368449 TRBV7-3A0A075B6L6 115 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 TRBV7-1A0A0A6YYK4 115 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 RNF183Q96D59 192 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 UBTD1Q9HAC8 227 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms