RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 MSMBP08118 114 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 SAA4P35542 130 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 Q0VFX4 171 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 HIGD1BQ9P298 99 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 ANAPC1Q9H1A4 1944 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 TRBV6-1A0A0K0K1D8 114 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 CRYGCP07315 174 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 SPTBP11277 2137 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 ATG2BQ96BY7 2078 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 Q6ZSR3 168 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 PCP2Q8IVA1 136 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 NOTCH4Q99466 2003 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 KLHL30-AS1Q8NEE0 82 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 PSCAO43653 123 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 LINC00479Q96M42 142 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 C15orf65H3BRN8 121 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 OVOL3O00110 214 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 FOXG1P55316 489 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-209ENST00000367257 FXYD5Q96DB9 178 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
SYNE1-209ENST00000367257 WNK1Q9H4A3 2382 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 HEATR5BQ9P2D3 2071 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 NDUFA7O95182 113 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 FXYD2P54710 66 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 C17orf58Q2M2W7 97 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 IGHV7-4-1A0A0J9YVY3 117 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 CENPVL3A0A0U1RRI6 287 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 TMEM213A2RRL7 107 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 IGKV1-16P04430 117 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 SPATA12Q7Z6I5 190 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 CFC1P0CG37 223 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 CD24P25063 80 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 DEFB131AP59861 70 aa7.08□□□□□ -1.28
SYNE1-209ENST00000367257 Q71RC1 249 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-209ENST00000367257 ATP6V0E1O15342 81 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 ZNF625Q96I27 306 aaPredicted RBP7.07□□□□□ -1.28
SYNE1-209ENST00000367257 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 LYNX1G3V0Z9 82 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 SMKR1H3BMG3 65 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 CCDC179H3BU77 68 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 LYNX1P0DP58 116 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 DAD1P61803 113 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 TET1Q8NFU7 2136 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 TNRC6AQ8NDV7 1962 aaKnown RBP7.07□□□□□ -1.28
SYNE1-209ENST00000367257 ABCA7Q8IZY2 2146 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 A0A087WWL8 130 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 NSUN5P1Q3KNT7 163 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 E7EQL1 145 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 CRLF1O75462 422 aa7.07□□□□□ -1.28
SYNE1-209ENST00000367257 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 LOXP28300 417 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-209ENST00000367257 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
SYNE1-209ENST00000367257 TMEM89A2RUT3 159 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 NDUFS7O75251 213 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 PDE6GP18545 87 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 NDPQ00604 133 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 SLC25A29Q8N8R3 303 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 ESPL1Q14674 2120 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 HEATR1Q9H583 2144 aaKnown RBP7.06□□□□□ -1.28
SYNE1-209ENST00000367257 IGKV1-39P01597 117 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 TFF1P04155 84 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 IGKV1D-39P04432 117 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 MUC22E2RYF6 1773 aaPredicted RBP7.06□□□□□ -1.28
SYNE1-209ENST00000367257 ARTNQ5T4W7 220 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 DKK2Q9UBU2 259 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 MSRB2Q9Y3D2 182 aa7.06□□□□□ -1.28
SYNE1-209ENST00000367257 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 SEC61GP60059 68 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
SYNE1-209ENST00000367257 COL8A2P25067 703 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 CXCL5P42830 114 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 LYPD2Q6UXB3 125 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 TRAV25A0A0B4J276 109 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 WIPF3A6NGB9 483 aa7.05□□□□□ -1.28
SYNE1-209ENST00000367257 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 RS1O15537 224 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 CR1LQ2VPA4 569 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 IGHG2P01859 326 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 CTRLP40313 264 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 DOCK6Q96HP0 2047 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 JMJD7-PLA2G4BH0Y9G9 81 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 DOCK9Q9BZ29 2069 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
SYNE1-209ENST00000367257 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 WT1-ASQ06250 92 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 ZNF491Q8N8L2 437 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 NPBQ8NG41 125 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 NDUFC2-KCTD14E9PQ53 114 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms