RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 LAGE3Q14657 143 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 TMEM155Q4W5P6 130 aa9.9□□□□□ -0.82
VAMP1-201ENST00000361716 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 MGPP08493 103 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 LOXP28300 417 aaPredicted RBP9.89□□□□□ -0.83
VAMP1-201ENST00000361716 PLEKHB2Q96CS7 222 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 IGLV3-9A0A075B6K5 115 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 PRR25Q96S07 402 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 SHANK2-AS3Q9BTD1 123 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 M0R381 172 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 IGLV2-23P01705 113 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
VAMP1-201ENST00000361716 IGHV3-64A0A075B6Q5 118 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE7O76087 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 TSPAN13O95857 204 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 TCL1BO95988 128 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 GAGE4Q13068 117 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 TEN1Q86WV5 123 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 RNASE6Q93091 150 aaKnown RBP9.88□□□□□ -0.83
VAMP1-201ENST00000361716 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP1-201ENST00000361716 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP1-201ENST00000361716 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP1-201ENST00000361716 MBD3L2Q8NHZ7 208 aaPredicted RBP9.88□□□□□ -0.83
VAMP1-201ENST00000361716 U3KQK5 164 aa9.88□□□□□ -0.83
VAMP1-201ENST00000361716 MYO18BQ8IUG5 2567 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 OVOL3O00110 214 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 PTPN13Q12923 2485 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 TRPT1Q86TN4 253 aaKnown RBP9.87□□□□□ -0.83
VAMP1-201ENST00000361716 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 A0A087WX48 190 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 LGALS1P09382 135 aaKnown RBP9.87□□□□□ -0.83
VAMP1-201ENST00000361716 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
VAMP1-201ENST00000361716 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 A0A0G2JNJ9 132 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 H7C1H1 209 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 PLNP26678 52 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 GATA4P43694 442 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 LYRM7Q5U5X0 104 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 Q9UFV3 132 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 FCN3O75636 299 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 NBL1P41271 181 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 RPL32P62910 135 aaKnown RBP9.86□□□□□ -0.83
VAMP1-201ENST00000361716 PRR30Q53SZ7 412 aaPredicted RBP9.86□□□□□ -0.83
VAMP1-201ENST00000361716 Q8N8P6 123 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 AJUBAQ96IF1 538 aa9.86□□□□□ -0.83
VAMP1-201ENST00000361716 USP9YO00507 2555 aaPredicted RBP9.86□□□□□ -0.83
VAMP1-201ENST00000361716 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 S100A4P26447 101 aaKnown RBP9.85□□□□□ -0.83
VAMP1-201ENST00000361716 IL17RELQ6ZVW7 336 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
VAMP1-201ENST00000361716 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 CRLF1O75462 422 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 CRYGCP07315 174 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 SRSF1Q07955 248 aaKnown RBP eCLIP9.85□□□□□ -0.83
VAMP1-201ENST00000361716 TAL2Q16559 108 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 OR11H6Q8NGC7 330 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 F8VRH5 84 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
VAMP1-201ENST00000361716 H3BRN7 92 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 Q6ZQT7 251 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 IGHV3OR16-10A0A075B7F0 116 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 BUB1B-PAK6H3BSN5 160 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 SLC25A20O43772 301 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 IFITM1P13164 125 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 NDUFV3P56181 108 aaKnown RBP9.84□□□□□ -0.83
VAMP1-201ENST00000361716 PAX8Q06710 450 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 CFHR4Q92496 578 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 PRAC2D3DTV9 90 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 ZMAT4Q9H898 229 aa9.84□□□□□ -0.83
VAMP1-201ENST00000361716 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 MFAP4P55083 255 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 C21orf62Q9NYP8 219 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 CRIP2P52943 208 aaPredicted RBP9.83□□□□□ -0.84
VAMP1-201ENST00000361716 NDPQ00604 133 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 TEX36Q5VZQ5 186 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
VAMP1-201ENST00000361716 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.82□□□□□ -0.84
VAMP1-201ENST00000361716 E7EQL1 145 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 CD3EP07766 207 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 WNK1Q9H4A3 2382 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms