RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NDUFS5O43920 106 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 WISP1O95388 367 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 CRYGBP07316 175 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 GATA4P43694 442 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 Q8TCH9 128 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 PTH2Q96A98 100 aa10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 RPL39LQ96EH5 51 aaKnown RBP10.57□□□□□ -0.72
CCDC144A-203ENST00000360495 RUSC1-AS1Q66K80 236 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 Q8NFD4 153 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 IGF2BP2-AS1Q96M15 143 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 CLPSL1A2RUU4 121 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 UBE2E1P51965 193 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 BRCA1P38398 1863 aaKnown RBP10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 ETV2O00321 342 aaPredicted RBP10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 RSPO1Q2MKA7 263 aaPredicted RBP10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 ARTNQ5T4W7 220 aa10.56□□□□□ -0.72
CCDC144A-203ENST00000360495 SPRY2O43597 315 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 CHD3Q12873 2000 aaKnown RBP10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 DIAPH2-AS1Q14236 149 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 DEFB105AQ8NG35 78 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 BPESC1Q9GZL8 116 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 E7EQL1 145 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 LOXP28300 417 aaPredicted RBP10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 LCTP09848 1927 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 ROS1P08922 2347 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 Q6ZUT4 128 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 GREB1LQ9C091 1923 aaPredicted RBP10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 CSRP1P21291 193 aaKnown RBP10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 SBF2Q86WG5 1849 aa10.55□□□□□ -0.72
CCDC144A-203ENST00000360495 WDR90Q96KV7 1748 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 H3BT86 120 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 XCL1P47992 114 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 IGFBPL1Q8WX77 278 aa10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 FUSP35637 526 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC144A-203ENST00000360495 LGALS9O00182 355 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 ZNF524Q96C55 264 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 LINC01619G3V211 115 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 IGLV3-1P01715 115 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 COX7B2Q8TF08 81 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 CLEC2BQ92478 149 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 MP68P56378 58 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 ZNF503-AS2A6NEH8 195 aa10.53□□□□□ -0.72
CCDC144A-203ENST00000360495 PLXNA1Q9UIW2 1896 aa10.52□□□□□ -0.72
CCDC144A-203ENST00000360495 IGHV4-28A0A0C4DH34 117 aa10.52□□□□□ -0.72
CCDC144A-203ENST00000360495 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.72
CCDC144A-203ENST00000360495 MT-ATP8P03928 68 aa10.52□□□□□ -0.72
CCDC144A-203ENST00000360495 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 E9PLD3 99 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 ATP5G1P05496 136 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 GP9P14770 177 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 A0A096LPF7 62 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
CCDC144A-203ENST00000360495 DAND5Q8N907 189 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 FRMD6-AS1P0C7T7 363 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 LENEPQ9Y5L5 61 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 CD59P13987 128 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 OPRPNQ99935 248 aaPredicted RBP10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 HEATR5AQ86XA9 2040 aa10.51□□□□□ -0.73
CCDC144A-203ENST00000360495 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 CACNA1GO43497 2377 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 NREPQ16612 68 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 Q71RC1 249 aaPredicted RBP10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 BAALCQ8WXS3 180 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 TET1Q8NFU7 2136 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 DOCK8Q8NF50 2099 aa10.5□□□□□ -0.73
CCDC144A-203ENST00000360495 ODF1Q14990 250 aa10.49□□□□□ -0.73
CCDC144A-203ENST00000360495 JMJD7-PLA2G4BH0Y9G9 81 aa10.49□□□□□ -0.73
CCDC144A-203ENST00000360495 IGHV1-69P01742 117 aa10.49□□□□□ -0.73
CCDC144A-203ENST00000360495 LECT2O14960 151 aa10.49□□□□□ -0.73
CCDC144A-203ENST00000360495 TCL1BO95988 128 aa10.48□□□□□ -0.73
CCDC144A-203ENST00000360495 U3KQE9 123 aa10.48□□□□□ -0.73
CCDC144A-203ENST00000360495 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
CCDC144A-203ENST00000360495 TOMM6Q96B49 74 aa10.48□□□□□ -0.73
CCDC144A-203ENST00000360495 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 HIST2H2BCQ6DN03 193 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 PATE2Q6UY27 113 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 MYLKQ15746 1914 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms