RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 Q8N8P6 123 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 CCL25O15444 150 aa4.55□□□□□ -1.68
BRCA1-203ENST00000357654 LINC01590Q5TEZ4 76 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 NMBP08949 121 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 CFPP27918 469 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 SRSF3P84103 164 aaKnown RBP4.54□□□□□ -1.68
BRCA1-203ENST00000357654 POU2AF1Q16633 256 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 MRPL51Q4U2R6 128 aaKnown RBP4.54□□□□□ -1.68
BRCA1-203ENST00000357654 DCANP1Q8TF63 244 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 COX7BP24311 80 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 J3QL48 77 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 J3QQQ9 107 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 ZNF493Q6ZR52 646 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 LINC00269Q8N2A0 174 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 RNF126Q9BV68 326 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 IGKV2-28A0A075B6P5 120 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 IGKV2D-28P01615 120 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 KIF13BQ9NQT8 1826 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 A0A087WV48 116 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 A0A087WWC5 75 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 IGHV2-5P01817 119 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 PYGO2Q9BRQ0 406 aa4.54□□□□□ -1.68
BRCA1-203ENST00000357654 PNRC2Q9NPJ4 139 aaKnown RBP4.54□□□□□ -1.68
BRCA1-203ENST00000357654 IGLV5-52A0A0A0MRZ9 124 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 MYCNOSP40205 109 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 IGLV3-21P80748 117 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LINC01620Q4KN68 170 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 TIAM2Q8IVF5 1701 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 ZNF236Q9UL36 1845 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 TMEM89A2RUT3 159 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 H3BMG7 143 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 UBE2CO00762 179 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 CTHRC1Q96CG8 243 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 SEC16AO15027 2179 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 RTTNQ86VV8 2226 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 RPL37AP8A6NKH3 93 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LGALS9O00182 355 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LY6G6DO95868 133 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 XGP55808 180 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LYPD1Q8N2G4 141 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LYPD3O95274 346 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 PPDPFLQ8WWR9 84 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 PRO1854Q9UHT4 67 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 TDRD15B5MCY1 1934 aaKnown RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 KNL1Q8NG31 2342 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 H0YIZ8 118 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 PLA2G5P39877 138 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 DAZ2Q13117 558 aaKnown RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 LINC01559Q495D7 138 aa4.53□□□□□ -1.68
BRCA1-203ENST00000357654 DAZ4Q86SG3 579 aaKnown RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 TMEM263Q8WUH6 116 aaKnown RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 NPDC1Q9NQX5 325 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 DAZ3Q9NR90 486 aaKnown RBP4.53□□□□□ -1.68
BRCA1-203ENST00000357654 PLAC8L1A1L4L8 177 aa4.53□□□□□ -1.69
BRCA1-203ENST00000357654 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.69
BRCA1-203ENST00000357654 SMCHD1A6NHR9 2005 aa4.53□□□□□ -1.69
BRCA1-203ENST00000357654 TRAV1-1A0A0B4J248 108 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-203ENST00000357654 FGF23Q9GZV9 251 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-203ENST00000357654 SS18L2Q9UHA2 77 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 HEATR1Q9H583 2144 aaKnown RBP4.52□□□□□ -1.69
BRCA1-203ENST00000357654 DLEC1Q9Y238 1755 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 WDR83OSQ9Y284 106 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 C4orf3Q8WVX3 66 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 SCN9AQ15858 1988 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 RBAKDNA6NC62 111 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 MRPL35Q9NZE8 188 aaKnown RBP4.52□□□□□ -1.69
BRCA1-203ENST00000357654 ZNF581Q9P0T4 197 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 WFDC13Q8IUB5 93 aa4.52□□□□□ -1.69
BRCA1-203ENST00000357654 A0A0U1RQV1 116 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 FAM231BA6NCW3 169 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 SPTBP11277 2137 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 FER1L5A0AVI2 2057 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 MYO7BQ6PIF6 2116 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 VWCEQ96DN2 955 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 KAAG1Q9UBP8 84 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 BPY2O14599 106 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 NDUFA11Q86Y39 141 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 MAST2Q6P0Q8 1798 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 C3orf84H3BNL1 204 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 CEND1Q8N111 149 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 CACNA1BQ00975 2339 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 PDCD11Q14690 1871 aaKnown RBP4.51□□□□□ -1.69
BRCA1-203ENST00000357654 A6NDX4 124 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 MED14OSP0DP75 135 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 FAM222AQ5U5X8 452 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 VOPP1Q96AW1 172 aa4.51□□□□□ -1.69
BRCA1-203ENST00000357654 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 LY6LH3BQJ8 138 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 DEFB1P60022 68 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 SPATA12Q7Z6I5 190 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 C1orf158Q8N1D5 194 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 SIVA1O15304 175 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 REG3AQ06141 175 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 SDK2Q58EX2 2172 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms