RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TRBV25-1A0A075B6N4 114 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 TRAV12-3A0A0B4J271 114 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 OVOL3O00110 214 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 BUB3O43684 328 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 ZNF688P0C7X2 276 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 RBX1P62877 108 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 PAX2Q02962 417 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 Q8N9W7 124 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 DPF1Q92782 380 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 SORL1Q92673 2214 aa5.3□□□□□ -1.56
RTN4-203ENST00000357376 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
RTN4-203ENST00000357376 GAS8-AS1O95177 125 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
RTN4-203ENST00000357376 ETDBQ3ZM63 59 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 C2CD3Q4AC94 2353 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 H3BMG7 143 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 ANXA2RQ3ZCQ2 193 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 GAGE13Q4V321 117 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 C2orf66Q6UXQ4 117 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 ZNF493Q6ZR52 646 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 CCL19Q99731 98 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 RHPN1-AS1Q9BWJ2 59 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 LINC01548A6NM66 108 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 OVOL1O14753 267 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 DGAT2L7PQ6IED9 249 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 SYT8Q8NBV8 401 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 PGPEP1Q9NXJ5 209 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 TRBV6-1A0A0K0K1D8 114 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 MRGPRG-AS1Q2M3A8 158 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
RTN4-203ENST00000357376 SNRPD3P62318 126 aaKnown RBP5.28□□□□□ -1.56
RTN4-203ENST00000357376 RPL39LQ96EH5 51 aaKnown RBP5.28□□□□□ -1.56
RTN4-203ENST00000357376 LINC00477Q96M19 166 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 SPOCK3Q9BQ16 436 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 MYO9AB2RTY4 2548 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 PTPN13Q12923 2485 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 IGHV3OR16-12A0A075B7B8 117 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 TNFRSF13BO14836 293 aaPredicted RBP5.28□□□□□ -1.56
RTN4-203ENST00000357376 ODF1Q14990 250 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 CEND1Q8N111 149 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 IGKV2D-26A0A0A0MRZ7 120 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 IGHV3-73A0A0B4J1V6 119 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 LY6LH3BQJ8 138 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 GNRH2O43555 120 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 PPP1R17O96001 155 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 SLC25A16P16260 332 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 LINC01559Q495D7 138 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 DUX5Q96PT3 197 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 MSRB2Q9Y3D2 182 aa5.28□□□□□ -1.56
RTN4-203ENST00000357376 SIVA1O15304 175 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 PRADC1Q9BSG0 188 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 IGKV3D-20A0A0C4DH25 116 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 TEX48A0A1B0GUV7 120 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 F8VRH5 84 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 ADORA2A-AS1P86434 159 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 SIGMAR1Q99720 223 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 SMAD5-AS1Q9Y6J3 95 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 WNK1Q9H4A3 2382 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 TRAV2A0A0B4J234 112 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 MRAP2Q96G30 205 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 ADGRG4Q8IZF6 3080 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 MUC3AQ02505 3323 aa5.27□□□□□ -1.57
RTN4-203ENST00000357376 USP9YO00507 2555 aaPredicted RBP5.26□□□□□ -1.57
RTN4-203ENST00000357376 TRAV12-2A0A075B6T6 113 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 A0A087WX48 190 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 CENPVL3A0A0U1RRI6 287 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 IGLC6P0CF74 106 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 LY6G5BQ8NDX9 201 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 TSSC4Q9Y5U2 329 aaPredicted RBP5.26□□□□□ -1.57
RTN4-203ENST00000357376 MYMXA0A1B0GTQ4 84 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 IGF1P05019 195 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 GNLYP22749 145 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 LINC01549A6NIU2 74 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 FAM223BA6NKX1 122 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 CDSNQ15517 529 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 Q6ZQT7 251 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 FAM223AQ8IWN6 122 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 CCDC140Q96MF4 163 aa5.26□□□□□ -1.57
RTN4-203ENST00000357376 ODF3BA8MYP8 253 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 TRBV12-3P01733 135 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 HLA-DRB4P13762 266 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 UNQ9165/PRO28630Q6UXU0 137 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 C1orf122Q6ZSJ8 110 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 DYNLRB2Q8TF09 96 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
RTN4-203ENST00000357376 KLK9Q9UKQ9 250 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 HLA-DRB4X5D2U9 266 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 A0A096LNJ9 63 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 PRSS29PA6NIE9 313 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 KLHL30-AS1Q8NEE0 82 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 RAX2Q96IS3 184 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 VCX2Q9H322 139 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 DMDP11532 3685 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms