RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SH2D6Q7Z4S9 175 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
CAPN9-202ENST00000354537 VCX2Q9H322 139 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 SPENQ96T58 3664 aaKnown RBP8.69□□□□□ -1.02
CAPN9-202ENST00000354537 COX6B1P14854 86 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 IGHV3-66A0A0C4DH42 116 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 PRSS29PA6NIE9 313 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 FAM223BA6NKX1 122 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 CRIP2P52943 208 aaPredicted RBP8.68□□□□□ -1.02
CAPN9-202ENST00000354537 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 FAM223AQ8IWN6 122 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 ZFAND2AQ8N6M9 145 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 FAM19A4Q96LR4 140 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 SPOCK3Q9BQ16 436 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 C1QTNF4Q9BXJ3 329 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 ROS1P08922 2347 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 OTOGLQ3ZCN5 2332 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 PKDREJQ9NTG1 2253 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 SCGB2A2Q13296 93 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
CAPN9-202ENST00000354537 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 A0A087WW49 117 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 LY6HO94772 140 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 NXPH4O95158 308 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 ZFP36P26651 326 aaKnown RBP8.67□□□□□ -1.02
CAPN9-202ENST00000354537 FOXI1Q12951 378 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 PRR9Q5T870 116 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 MTURNQ8N3F0 131 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
CAPN9-202ENST00000354537 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 APOMO95445 188 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 UBE2D3P61077 147 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 HERVK_113P61574 105 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 UBE2D2P62837 147 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 MRPL16Q9NX20 251 aaKnown RBP8.66□□□□□ -1.02
CAPN9-202ENST00000354537 PHLDA3Q9Y5J5 127 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 BRI3O95415 125 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
CAPN9-202ENST00000354537 C19orf54Q5BKX5 351 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
CAPN9-202ENST00000354537 TRBV20-1A0A075B6N2 111 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 SOCS3O14543 225 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 CD7P09564 240 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
CAPN9-202ENST00000354537 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
CAPN9-202ENST00000354537 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.03
CAPN9-202ENST00000354537 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 G3V318 75 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 NDUFA4O00483 81 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
CAPN9-202ENST00000354537 CLEC2AQ6UVW9 174 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 Q6ZQT7 251 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
CAPN9-202ENST00000354537 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CAPN9-202ENST00000354537 K7ENP7 123 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 TSPAN13O95857 204 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 KLK15Q9H2R5 256 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 MUC6Q6W4X9 2439 aa8.64□□□□□ -1.03
CAPN9-202ENST00000354537 CRYGDP07320 174 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
CAPN9-202ENST00000354537 PMVKQ15126 192 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 TIMM17AQ99595 171 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 RP1L1Q8IWN7 2480 aaPredicted RBP8.63□□□□□ -1.03
CAPN9-202ENST00000354537 IGHV3-49A0A0A0MS15 119 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 M0QXV9 152 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 SAA4P35542 130 aa8.63□□□□□ -1.03
CAPN9-202ENST00000354537 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 A0A0J9YY99 117 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 H3BUA1 57 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 CCL21O00585 134 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 VCYO14598 125 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 ARL3P36405 182 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
CAPN9-202ENST00000354537 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 PPDPFLQ8WWR9 84 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 CACNA1HO95180 2353 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 EP300Q09472 2414 aaPredicted RBP8.62□□□□□ -1.03
CAPN9-202ENST00000354537 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 NPFFO15130 113 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 MGPP08493 103 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms