RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HIST2H2BEQ16778 126 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.21■□□□□ 0.02
TRIM4-202ENST00000354241 AMTNQ6UX39 209 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 SPATA3Q8NHX4 192 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 HIST1H2BHQ93079 126 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 HIST1H2BNQ99877 126 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 HIST1H2BMQ99879 126 aa15.21■□□□□ 0.02
TRIM4-202ENST00000354241 A0A1B0GUT8 65 aa15.2■□□□□ 0.02
TRIM4-202ENST00000354241 C7orf71A4D174 169 aa15.2■□□□□ 0.02
TRIM4-202ENST00000354241 MT-ND6P03923 174 aa15.2■□□□□ 0.02
TRIM4-202ENST00000354241 FXYD7P58549 80 aa15.2■□□□□ 0.02
TRIM4-202ENST00000354241 MUC21Q5SSG8 566 aa15.2■□□□□ 0.02
TRIM4-202ENST00000354241 TRAV12-3A0A0B4J271 114 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 UBE2CO00762 179 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 IGLC6P0CF74 106 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 SSTP61278 116 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 S100A12P80511 92 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 GFI1BQ5VTD9 330 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 MUC21A0A0G2JKD1 596 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 MUC21A0A140T8X8 626 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 HLA-DQA1P01909 254 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 S100A6P06703 90 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 RIGQ13278 110 aa15.19■□□□□ 0.02
TRIM4-202ENST00000354241 A8MTW9 85 aa15.18■□□□□ 0.02
TRIM4-202ENST00000354241 S100A8P05109 93 aa15.18■□□□□ 0.02
TRIM4-202ENST00000354241 ANXA2RQ3ZCQ2 193 aa15.18■□□□□ 0.02
TRIM4-202ENST00000354241 RBMY1BA6NDE4 496 aaKnown RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 RBMY1EA6NEQ0 496 aaKnown RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 RBMY1DP0C7P1 496 aaKnown RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 SNRPEP62304 92 aaKnown RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 C9orf66Q5T8R8 295 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 ATRQ13535 2644 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 CD7P09564 240 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 CTRLP40313 264 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 BEAN1Q3B7T3 259 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 PRR31Q5SQ13 230 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 ZNF747Q9BV97 191 aa15.17■□□□□ 0.02
TRIM4-202ENST00000354241 SSBP4Q9BWG4 385 aaPredicted RBP15.17■□□□□ 0.02
TRIM4-202ENST00000354241 STHQ8IWL8 128 aa15.16■□□□□ 0.02
TRIM4-202ENST00000354241 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
TRIM4-202ENST00000354241 PCP4L1A6NKN8 68 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 APCSP02743 223 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 INSL3P51460 131 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 NDUFA6P56556 154 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 C3orf56Q8N813 242 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 ZNF324O75467 553 aaPredicted RBP15.15■□□□□ 0.02
TRIM4-202ENST00000354241 SMIM6P0DI80 62 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 FAM159AQ6UWV7 190 aa15.15■□□□□ 0.02
TRIM4-202ENST00000354241 F2Z2F3 143 aa15.14■□□□□ 0.01
TRIM4-202ENST00000354241 SLAQ13239 276 aa15.14■□□□□ 0.01
TRIM4-202ENST00000354241 KIAA1644Q3SXP7 199 aa15.14■□□□□ 0.01
TRIM4-202ENST00000354241 TIMM8BQ9Y5J9 83 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-202ENST00000354241 A0A1B0GW15 77 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 H3BVH4 76 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 GNRH2O43555 120 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 ASIPP42127 132 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 CTAG1AP78358 180 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 TWIST1Q15672 202 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 S100A4P26447 101 aaKnown RBP15.13■□□□□ 0.01
TRIM4-202ENST00000354241 C12orf54Q6X4T0 127 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 WFDC10AQ9H1F0 79 aa15.13■□□□□ 0.01
TRIM4-202ENST00000354241 NTF3P20783 257 aa15.12■□□□□ 0.01
TRIM4-202ENST00000354241 KCNS1Q96KK3 526 aa15.12■□□□□ 0.01
TRIM4-202ENST00000354241 CRXO43186 299 aaPredicted RBP15.11■□□□□ 0.01
TRIM4-202ENST00000354241 FAM110AQ9BQ89 295 aa15.11■□□□□ 0.01
TRIM4-202ENST00000354241 TRPT1Q86TN4 253 aaKnown RBP15.11■□□□□ 0.01
TRIM4-202ENST00000354241 OR10AG1Q8NH19 301 aa15.11■□□□□ 0.01
TRIM4-202ENST00000354241 CLUHP3Q96NS8 147 aa15.11■□□□□ 0.01
TRIM4-202ENST00000354241 MCRIP2Q9BUT9 160 aaKnown RBP15.11■□□□□ 0.01
TRIM4-202ENST00000354241 C19orf73Q9NVV2 129 aa15.11■□□□□ 0.01
TRIM4-202ENST00000354241 OR5AL1P0C617 328 aa15.1■□□□□ 0.01
TRIM4-202ENST00000354241 CNFNQ9BYD5 112 aa15.1■□□□□ 0.01
TRIM4-202ENST00000354241 MAST4O15021 2626 aa15.1■□□□□ 0.01
TRIM4-202ENST00000354241 IGHV1OR15-1A0A075B7D0 117 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 SNAI2O43623 268 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 RBMY1A1P0DJD3 496 aaKnown RBP15.09■□□□□ 0.01
TRIM4-202ENST00000354241 RBMY1CP0DJD4 496 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 RBMY1FQ15415 496 aaKnown RBP15.09■□□□□ 0.01
TRIM4-202ENST00000354241 SHISA2Q6UWI4 295 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 GATD1Q8NB37 220 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 TMEM158Q8WZ71 300 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 MSRB1Q9NZV6 116 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 WFDC9Q8NEX5 89 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 TP53TG3Q9ULZ0 132 aa15.09■□□□□ 0.01
TRIM4-202ENST00000354241 IGLL1P15814 213 aa15.08■□□□□ 0
TRIM4-202ENST00000354241 TDRG1Q3Y452 100 aa15.08■□□□□ 0
TRIM4-202ENST00000354241 SPANXN1Q5VSR9 72 aa15.08■□□□□ 0
TRIM4-202ENST00000354241 SRIP30626 198 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 DNLZQ5SXM8 178 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 SPRY2O43597 315 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 INSP01308 110 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 MED14OSP0DP75 135 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 RNASE3P12724 160 aaKnown RBP15.07■□□□□ 0
TRIM4-202ENST00000354241 CACNG7P62955 275 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 ZNF493Q6ZR52 646 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 GTSCR1Q86UQ5 136 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 PHLDA3Q9Y5J5 127 aa15.07■□□□□ 0
TRIM4-202ENST00000354241 NUTF2P61970 127 aaKnown RBP15.06■□□□□ 0
TRIM4-202ENST00000354241 XCL2Q9UBD3 114 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms