RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
PMS1-201ENST00000342075 LEPP41159 167 aa10.15□□□□□ -0.78
PMS1-201ENST00000342075 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
PMS1-201ENST00000342075 Q6AWC8 147 aa10.15□□□□□ -0.79
PMS1-201ENST00000342075 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.79
PMS1-201ENST00000342075 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.79
PMS1-201ENST00000342075 MUC4Q99102 2169 aa10.15□□□□□ -0.79
PMS1-201ENST00000342075 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
PMS1-201ENST00000342075 SAMD5Q5TGI4 173 aa10.14□□□□□ -0.79
PMS1-201ENST00000342075 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 EGFEM1PQ0D2K5 195 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 MRPL54Q6P161 138 aaKnown RBP10.13□□□□□ -0.79
PMS1-201ENST00000342075 NUP35Q8NFH5 326 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 ODF3Q96PU9 254 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 FAM110AQ9BQ89 295 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 TMEM242Q9NWH2 141 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 SMIM27A0A1W2PRY6 76 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 COLCA2A8K830 154 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 PPP1R2P9O14990 202 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 IGHV4-30-4P0DP06 118 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 TSKUQ8WUA8 353 aa10.13□□□□□ -0.79
PMS1-201ENST00000342075 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 BIN3Q9NQY0 253 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 H3BVH4 76 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 TYMSP04818 313 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 TSPOP30536 169 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
PMS1-201ENST00000342075 TRBV7-9A0A0J9YWB2 115 aa10.11□□□□□ -0.79
PMS1-201ENST00000342075 ARMS2P0C7Q2 107 aa10.11□□□□□ -0.79
PMS1-201ENST00000342075 LYZL1Q6UWQ5 148 aa10.11□□□□□ -0.79
PMS1-201ENST00000342075 A8MWL6 223 aa10.1□□□□□ -0.79
PMS1-201ENST00000342075 AZU1P20160 251 aa10.1□□□□□ -0.79
PMS1-201ENST00000342075 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
PMS1-201ENST00000342075 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
PMS1-201ENST00000342075 FAM159AQ6UWV7 190 aa10.1□□□□□ -0.79
PMS1-201ENST00000342075 TUBA4BQ9H853 241 aa10.1□□□□□ -0.79
PMS1-201ENST00000342075 INSP01308 110 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
PMS1-201ENST00000342075 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 LINC01587Q99440 93 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 CXorf65A6NEN9 183 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 COL7A1Q02388 2944 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 MEGF8Q7Z7M0 2845 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
PMS1-201ENST00000342075 S100PP25815 95 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 CT83Q5H943 113 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 TMEM208Q9BTX3 173 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 NAT8BQ9UHF3 227 aa10.09□□□□□ -0.79
PMS1-201ENST00000342075 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 CBY3A6NI87 242 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 IGLC6P0CF74 106 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 CAMPP49913 170 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
PMS1-201ENST00000342075 DEFB135Q30KP9 77 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 FER1L6-AS1Q8NA97 138 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 FAM210BQ96KR6 192 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
PMS1-201ENST00000342075 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
PMS1-201ENST00000342075 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
PMS1-201ENST00000342075 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
PMS1-201ENST00000342075 IMMP2LQ96T52 175 aa10.07□□□□□ -0.8
PMS1-201ENST00000342075 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
PMS1-201ENST00000342075 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
PMS1-201ENST00000342075 M0R381 172 aa10.06□□□□□ -0.8
PMS1-201ENST00000342075 RAB5AP20339 215 aa10.06□□□□□ -0.8
PMS1-201ENST00000342075 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
PMS1-201ENST00000342075 RETNQ9HD89 108 aa10.06□□□□□ -0.8
PMS1-201ENST00000342075 TMA7Q9Y2S6 64 aaKnown RBP10.06□□□□□ -0.8
PMS1-201ENST00000342075 TRBV24-1A0A075B6N3 115 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 NTF3P20783 257 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 ASIPP42127 132 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 RPS10P46783 165 aaKnown RBP10.05□□□□□ -0.8
PMS1-201ENST00000342075 BTF3L4Q96K17 158 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 GFRA4Q9GZZ7 299 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 GSN-AS1Q9NRJ2 163 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 RAB4BP61018 213 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 JPT2Q9H910 190 aa10.05□□□□□ -0.8
PMS1-201ENST00000342075 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
PMS1-201ENST00000342075 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
PMS1-201ENST00000342075 XKRY2A2RUG3 117 aa10.04□□□□□ -0.8
PMS1-201ENST00000342075 K7EIL1 84 aa10.04□□□□□ -0.8
PMS1-201ENST00000342075 DEFB4AO15263 64 aa10.04□□□□□ -0.8
PMS1-201ENST00000342075 CTRLP40313 264 aa10.04□□□□□ -0.8
PMS1-201ENST00000342075 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 TRGC2P03986 189 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 EMP1P54849 157 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
PMS1-201ENST00000342075 TWIST1Q15672 202 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 A0A1B0GUT8 65 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 KIAA1644Q3SXP7 199 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 MORN3Q6PF18 240 aaPredicted RBP10.03□□□□□ -0.8
PMS1-201ENST00000342075 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
PMS1-201ENST00000342075 SNURFLB1AK76 121 aa10.02□□□□□ -0.8
PMS1-201ENST00000342075 ZNF705AQ6ZN79 300 aaPredicted RBP10.02□□□□□ -0.8
PMS1-201ENST00000342075 KCNS1Q96KK3 526 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms