RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 MTORP42345 2549 aa12.15□□□□□ -0.46
HPS1-202ENST00000338546 NTF3P20783 257 aa12.14□□□□□ -0.47
HPS1-202ENST00000338546 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
HPS1-202ENST00000338546 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
HPS1-202ENST00000338546 DEFB1P60022 68 aa12.13□□□□□ -0.47
HPS1-202ENST00000338546 JOSD1Q15040 202 aaPredicted RBP12.13□□□□□ -0.47
HPS1-202ENST00000338546 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
HPS1-202ENST00000338546 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
HPS1-202ENST00000338546 SELENOKQ9Y6D0 94 aa12.13□□□□□ -0.47
HPS1-202ENST00000338546 U3KQK5 164 aa12.13□□□□□ -0.47
HPS1-202ENST00000338546 CHCHD1Q96BP2 118 aaKnown RBP12.13□□□□□ -0.47
HPS1-202ENST00000338546 SAMD10Q9BYL1 202 aa12.13□□□□□ -0.47
HPS1-202ENST00000338546 OR4C46A6NHA9 309 aa12.12□□□□□ -0.47
HPS1-202ENST00000338546 A8MTW9 85 aa12.12□□□□□ -0.47
HPS1-202ENST00000338546 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
HPS1-202ENST00000338546 INAFM1C9JVW0 142 aa12.11□□□□□ -0.47
HPS1-202ENST00000338546 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
HPS1-202ENST00000338546 PPBPP02775 128 aa12.11□□□□□ -0.47
HPS1-202ENST00000338546 ASIPP42127 132 aa12.11□□□□□ -0.47
HPS1-202ENST00000338546 RCHY1Q96PM5 261 aa12.11□□□□□ -0.47
HPS1-202ENST00000338546 C7orf71A4D174 169 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 CDKN1BP46527 198 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 SMIM15Q7Z3B0 74 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 ORMDL3Q8N138 153 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 C11orf44Q8N8P7 122 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
HPS1-202ENST00000338546 A0A1W2PRX2 142 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 CRLF1O75462 422 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 PMCHP20382 165 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 ANXA2RQ3ZCQ2 193 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 NIT1Q86X76 327 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 SCRT2Q9NQ03 307 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 J3KRW8 73 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 HSBP1O75506 76 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 CD33P20138 364 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 AMTP48728 403 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
HPS1-202ENST00000338546 CD300EQ496F6 205 aaPredicted RBP12.09□□□□□ -0.47
HPS1-202ENST00000338546 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
HPS1-202ENST00000338546 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 NAGKQ9UJ70 344 aa12.09□□□□□ -0.47
HPS1-202ENST00000338546 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 LINC00614P0C842 121 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 RAB4AP20338 218 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
HPS1-202ENST00000338546 DEFB131AP59861 70 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 S100A12P80511 92 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 Q6ZQT7 251 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 OR2K2Q8NGT1 345 aa12.08□□□□□ -0.48
HPS1-202ENST00000338546 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
HPS1-202ENST00000338546 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
HPS1-202ENST00000338546 MUC21Q5SSG8 566 aa12.07□□□□□ -0.48
HPS1-202ENST00000338546 OR10AG1Q8NH19 301 aa12.07□□□□□ -0.48
HPS1-202ENST00000338546 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
HPS1-202ENST00000338546 D6R8Y8 96 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 H3BMM0 161 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 H3BVH4 76 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 RNASEKQ6P5S7 137 aaKnown RBP12.06□□□□□ -0.48
HPS1-202ENST00000338546 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 PRELID3AQ96N28 172 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 MAP6D1Q9H9H5 199 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 MAST4O15021 2626 aa12.06□□□□□ -0.48
HPS1-202ENST00000338546 CKS2P33552 79 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 Q6ZWC4 215 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 URB1-AS1Q96HZ7 61 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 NF1P21359 2839 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 NXPH4O95158 308 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 SSTP61278 116 aa12.05□□□□□ -0.48
HPS1-202ENST00000338546 RNASE3P12724 160 aaKnown RBP12.04□□□□□ -0.48
HPS1-202ENST00000338546 M0R2Z0 102 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 GNRH2O43555 120 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 HIST2H2BDQ6DRA6 164 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
HPS1-202ENST00000338546 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 KNCNA6PVL3 124 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 IGKV3-20P01619 116 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 DEFB125Q8N687 156 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 C20orf144Q9BQM9 153 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
HPS1-202ENST00000338546 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 EVI2AP22794 236 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms