RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
PRPF3-201ENST00000324862 CSTL1Q9H114 145 aa11.13□□□□□ -0.63
PRPF3-201ENST00000324862 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
PRPF3-201ENST00000324862 SPINK4O60575 86 aa11.12□□□□□ -0.63
PRPF3-201ENST00000324862 CSNK1G2-AS1Q8NCQ2 148 aa11.12□□□□□ -0.63
PRPF3-201ENST00000324862 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 K7EIL1 84 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 INSP01308 110 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 NEU1Q99519 415 aa11.11□□□□□ -0.63
PRPF3-201ENST00000324862 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-201ENST00000324862 A0A087WWC5 75 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 FRMD6-AS1P0C7T7 363 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 KPRPQ5T749 579 aaPredicted RBP11.1□□□□□ -0.63
PRPF3-201ENST00000324862 LINC01587Q99440 93 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 TYMSP04818 313 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 TMEM208Q9BTX3 173 aa11.1□□□□□ -0.63
PRPF3-201ENST00000324862 AZU1P20160 251 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 MEGF8Q7Z7M0 2845 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 CTDSP1Q9GZU7 261 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
PRPF3-201ENST00000324862 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 MORN3Q6PF18 240 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-201ENST00000324862 TSKUQ8WUA8 353 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 PGLYRP4Q96LB8 373 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
PRPF3-201ENST00000324862 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
PRPF3-201ENST00000324862 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 CBY3A6NI87 242 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 H3BVH4 76 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 DEFB121Q5J5C9 76 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 RETNQ9HD89 108 aa11.07□□□□□ -0.64
PRPF3-201ENST00000324862 A8MWL6 223 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 CXCL1P09341 107 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
PRPF3-201ENST00000324862 ELOBQ15370 118 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-201ENST00000324862 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 CT83Q5H943 113 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 LYZL1Q6UWQ5 148 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 SMCO4Q9NRQ5 59 aa11.06□□□□□ -0.64
PRPF3-201ENST00000324862 PRKDCP78527 4128 aaKnown RBP11.06□□□□□ -0.64
PRPF3-201ENST00000324862 AMBPP02760 352 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 APOC4P55056 127 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 ZNF705AQ6ZN79 300 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-201ENST00000324862 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
PRPF3-201ENST00000324862 OR10AG1Q8NH19 301 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
PRPF3-201ENST00000324862 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
PRPF3-201ENST00000324862 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 KIR2DL5BQ8NHK3 375 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 GSN-AS1Q9NRJ2 163 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 MSRB1Q9NZV6 116 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
PRPF3-201ENST00000324862 A8MZ25 164 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 ASIPP42127 132 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
PRPF3-201ENST00000324862 DEFB4AO15263 64 aa11.03□□□□□ -0.64
PRPF3-201ENST00000324862 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
PRPF3-201ENST00000324862 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
PRPF3-201ENST00000324862 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
PRPF3-201ENST00000324862 X6R8D5 127 aa11.03□□□□□ -0.64
PRPF3-201ENST00000324862 DNAH9Q9NYC9 4486 aa11.02□□□□□ -0.65
PRPF3-201ENST00000324862 XKRY2A2RUG3 117 aa11.02□□□□□ -0.65
PRPF3-201ENST00000324862 CXorf65A6NEN9 183 aa11.02□□□□□ -0.65
PRPF3-201ENST00000324862 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-201ENST00000324862 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
PRPF3-201ENST00000324862 EMP1P54849 157 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
PRPF3-201ENST00000324862 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 COLCA2A8K830 154 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 M0R381 172 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 S100PP25815 95 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 CAMPP49913 170 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 KCNIP4Q6PIL6 250 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 TMEM256Q8N2U0 113 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
PRPF3-201ENST00000324862 RCHY1Q96PM5 261 aa11.01□□□□□ -0.65
PRPF3-201ENST00000324862 MUC4Q99102 2169 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms