RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 MRPL16Q9NX20 251 aaKnown RBP13.22□□□□□ -0.29
CIRBP-201ENST00000320936 SACSQ9NZJ4 4579 aa13.22□□□□□ -0.29
CIRBP-201ENST00000320936 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-201ENST00000320936 KCNS1Q96KK3 526 aa13.21□□□□□ -0.29
CIRBP-201ENST00000320936 MDFICQ9P1T7 246 aa13.21□□□□□ -0.29
CIRBP-201ENST00000320936 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
CIRBP-201ENST00000320936 CCL20P78556 96 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 OR5I1Q13606 314 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 ALKAL2Q6UX46 152 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 LINC00612Q8N6U2 182 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 DNAH1Q9P2D7 4330 aa13.2□□□□□ -0.3
CIRBP-201ENST00000320936 TRAV1-1A0A0B4J248 108 aa13.19□□□□□ -0.3
CIRBP-201ENST00000320936 GNRH2O43555 120 aa13.19□□□□□ -0.3
CIRBP-201ENST00000320936 IFNA1P01562 189 aa13.19□□□□□ -0.3
CIRBP-201ENST00000320936 TDRG1Q3Y452 100 aa13.19□□□□□ -0.3
CIRBP-201ENST00000320936 RYR3Q15413 4870 aa13.19□□□□□ -0.3
CIRBP-201ENST00000320936 SPINK4O60575 86 aa13.18□□□□□ -0.3
CIRBP-201ENST00000320936 TYMSP04818 313 aa13.18□□□□□ -0.3
CIRBP-201ENST00000320936 ZFP30Q9Y2G7 519 aa13.18□□□□□ -0.3
CIRBP-201ENST00000320936 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
CIRBP-201ENST00000320936 SPXQ9BT56 116 aa13.17□□□□□ -0.3
CIRBP-201ENST00000320936 IGHV3-16A0A0C4DH30 117 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 NUDT3O95989 172 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 LGALS9BQ3B8N2 356 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 C15orf53Q8NAA6 179 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 C11orf21Q9P2W6 132 aa13.16□□□□□ -0.3
CIRBP-201ENST00000320936 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 LTAP01374 205 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 S100A9P06702 114 aaKnown RBP13.15□□□□□ -0.3
CIRBP-201ENST00000320936 P0DMU3 169 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 RYR2Q92736 4967 aa13.15□□□□□ -0.3
CIRBP-201ENST00000320936 A0A0J9YY99 117 aa13.14□□□□□ -0.31
CIRBP-201ENST00000320936 TRBV6-1A0A0K0K1D8 114 aa13.14□□□□□ -0.31
CIRBP-201ENST00000320936 ORM1P02763 201 aa13.14□□□□□ -0.31
CIRBP-201ENST00000320936 HOXA5P20719 270 aa13.14□□□□□ -0.31
CIRBP-201ENST00000320936 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
CIRBP-201ENST00000320936 M0R2P5 195 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 SH2D1AO60880 128 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 B4DEV8 164 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 M0R036 132 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 BCL2P10415 239 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 S100A4P26447 101 aaKnown RBP13.13□□□□□ -0.31
CIRBP-201ENST00000320936 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-201ENST00000320936 C18orf15Q96N68 181 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
CIRBP-201ENST00000320936 MUC4Q99102 2169 aa13.12□□□□□ -0.31
CIRBP-201ENST00000320936 C9JCJ5 164 aa13.12□□□□□ -0.31
CIRBP-201ENST00000320936 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
CIRBP-201ENST00000320936 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
CIRBP-201ENST00000320936 PDE6DO43924 150 aa13.11□□□□□ -0.31
CIRBP-201ENST00000320936 ASIPP42127 132 aa13.11□□□□□ -0.31
CIRBP-201ENST00000320936 C11orf52Q96A22 123 aa13.11□□□□□ -0.31
CIRBP-201ENST00000320936 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
CIRBP-201ENST00000320936 VAX2Q9UIW0 290 aa13.11□□□□□ -0.31
CIRBP-201ENST00000320936 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 TRGV4A0A0C4DH28 118 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 TAGLN2P37802 199 aaKnown RBP13.1□□□□□ -0.31
CIRBP-201ENST00000320936 CRIP1P50238 77 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 PRR27Q6MZM9 219 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 RASL10AQ92737 203 aa13.1□□□□□ -0.31
CIRBP-201ENST00000320936 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 CENPWQ5EE01 88 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 OR4C5Q8NGB2 326 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 MED9Q9NWA0 146 aa13.09□□□□□ -0.31
CIRBP-201ENST00000320936 VPS13DQ5THJ4 4388 aa13.08□□□□□ -0.32
CIRBP-201ENST00000320936 H3BVH4 76 aa13.08□□□□□ -0.32
CIRBP-201ENST00000320936 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
CIRBP-201ENST00000320936 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
CIRBP-201ENST00000320936 TRAV4A0A0B4J268 109 aa13.07□□□□□ -0.32
CIRBP-201ENST00000320936 GRIFINA4D1Z8 144 aa13.07□□□□□ -0.32
CIRBP-201ENST00000320936 KRBOX1C9JBD0 128 aa13.07□□□□□ -0.32
CIRBP-201ENST00000320936 PAX4O43316 350 aa13.07□□□□□ -0.32
CIRBP-201ENST00000320936 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
CIRBP-201ENST00000320936 MGST1P10620 155 aaKnown RBP13.06□□□□□ -0.32
CIRBP-201ENST00000320936 RNASE3P12724 160 aaKnown RBP13.06□□□□□ -0.32
CIRBP-201ENST00000320936 GNG4P50150 75 aa13.06□□□□□ -0.32
CIRBP-201ENST00000320936 PRO0255Q9UI72 69 aa13.06□□□□□ -0.32
CIRBP-201ENST00000320936 HHLA3Q9XRX5 114 aa13.06□□□□□ -0.32
CIRBP-201ENST00000320936 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 H3BNG1 76 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 CCL18P55774 89 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 SLAQ13239 276 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 FHL2Q14192 279 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 RNF212Q495C1 297 aa13.05□□□□□ -0.32
CIRBP-201ENST00000320936 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms