RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TMUB2Q71RG4 321 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 AQP10Q96PS8 301 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 KCNIP2Q9NS61 270 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 FLG2Q5D862 2391 aaPredicted RBP11.82□□□□□ -0.52
EXOSC4-201ENST00000316052 DNAH8Q96JB1 4490 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 SRIP30626 198 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 SPXQ9BT56 116 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 MSRB1Q9NZV6 116 aa11.81□□□□□ -0.52
EXOSC4-201ENST00000316052 C17orf112F2Z3M2 114 aa11.8□□□□□ -0.52
EXOSC4-201ENST00000316052 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
EXOSC4-201ENST00000316052 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
EXOSC4-201ENST00000316052 GNRH2O43555 120 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 NDUFA5Q16718 116 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 TEX261Q6UWH6 196 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 FAM159AQ6UWV7 190 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 ATP5SQ99766 215 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
EXOSC4-201ENST00000316052 TRGV11A0A075B6L2 103 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 KANTRA0A1W2PQU2 76 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 BCL2L11O43521 198 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 IFNA7P01567 189 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 EVI2AP22794 236 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 TDRG1Q3Y452 100 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 NAGKQ9UJ70 344 aa11.78□□□□□ -0.52
EXOSC4-201ENST00000316052 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 PGPA6NDG6 321 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 TAAR5O14804 337 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 ORM1P02763 201 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 KHDC3LQ587J8 217 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 PCNPQ8WW12 178 aaKnown RBP11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 TMED6Q8WW62 240 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 OTORQ9NRC9 128 aa11.77□□□□□ -0.53
EXOSC4-201ENST00000316052 IGHV3-16A0A0C4DH30 117 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 K7EP13 123 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 M0R2P5 195 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 IFNA5P01569 189 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 OR4C5Q8NGB2 326 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 STOML3Q8TAV4 291 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
EXOSC4-201ENST00000316052 C9JCJ5 164 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 CRYGDP07320 174 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 RPL12P30050 165 aaKnown RBP11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 TAS2R45P59539 299 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 Q5VSD8 79 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 WFDC1Q9HC57 220 aa11.75□□□□□ -0.53
EXOSC4-201ENST00000316052 TYMSP04818 313 aa11.74□□□□□ -0.53
EXOSC4-201ENST00000316052 EIF5AP63241 154 aaKnown RBP11.74□□□□□ -0.53
EXOSC4-201ENST00000316052 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
EXOSC4-201ENST00000316052 SCGB1C1Q8TD33 95 aa11.74□□□□□ -0.53
EXOSC4-201ENST00000316052 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
EXOSC4-201ENST00000316052 F6UZH7 168 aa11.73□□□□□ -0.53
EXOSC4-201ENST00000316052 SMR3BP02814 79 aaPredicted RBP11.73□□□□□ -0.53
EXOSC4-201ENST00000316052 GCSHP23434 173 aa11.73□□□□□ -0.53
EXOSC4-201ENST00000316052 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
EXOSC4-201ENST00000316052 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
EXOSC4-201ENST00000316052 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
EXOSC4-201ENST00000316052 GATA1P15976 413 aaPredicted RBP11.72□□□□□ -0.53
EXOSC4-201ENST00000316052 GNG5P63218 68 aa11.72□□□□□ -0.53
EXOSC4-201ENST00000316052 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
EXOSC4-201ENST00000316052 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 TIRAPP58753 221 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 RAB2AP61019 212 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 HAMPP81172 84 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 NHLRC2Q8NBF2 726 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 FRZBQ92765 325 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 SGK494Q96LW2 274 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
EXOSC4-201ENST00000316052 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 CLLU1Q5K131 121 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 FAM74A1Q5RGS3 127 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 PQLC2Q6ZP29 291 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 SH2D6Q7Z4S9 175 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
EXOSC4-201ENST00000316052 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 RAB14P61106 215 aa11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 EIF5AL1Q6IS14 154 aaKnown RBP11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 DPPA3Q6W0C5 159 aa11.69□□□□□ -0.54
EXOSC4-201ENST00000316052 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
EXOSC4-201ENST00000316052 PPT1P50897 306 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms