RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 KRTAP10-3P60369 221 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 CUBNO60494 3623 aa12.45□□□□□ -0.42
CLCF1-201ENST00000312438 NUPR1O60356 82 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 ESDP10768 282 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 NAGKQ9UJ70 344 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 SERF1AO75920 110 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 AMBPP02760 352 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 CDKN1BP46527 198 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 PRR31Q5SQ13 230 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 OR10D4PQ8NGN7 298 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 C18orf32Q8TCD1 76 aa12.44□□□□□ -0.42
CLCF1-201ENST00000312438 ZNF256Q9Y2P7 627 aaPredicted RBP12.44□□□□□ -0.42
CLCF1-201ENST00000312438 C7orf71A4D174 169 aa12.43□□□□□ -0.42
CLCF1-201ENST00000312438 SNAI2O43623 268 aa12.43□□□□□ -0.42
CLCF1-201ENST00000312438 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
CLCF1-201ENST00000312438 NF1P21359 2839 aa12.42□□□□□ -0.42
CLCF1-201ENST00000312438 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
CLCF1-201ENST00000312438 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
CLCF1-201ENST00000312438 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
CLCF1-201ENST00000312438 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
CLCF1-201ENST00000312438 IGHV4-4A0A075B6R2 117 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 H3BMM0 161 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
CLCF1-201ENST00000312438 ASIPP42127 132 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 LINC00310P59036 64 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 CACNG7P62955 275 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 MSRB1Q9NZV6 116 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 SAP30O75446 220 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 S100A4P26447 101 aaKnown RBP12.41□□□□□ -0.42
CLCF1-201ENST00000312438 DNLZQ5SXM8 178 aa12.41□□□□□ -0.42
CLCF1-201ENST00000312438 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 A8MTW9 85 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 M0R2Z0 102 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.42
CLCF1-201ENST00000312438 H3BVH4 76 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 GNRH2O43555 120 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 IQCJQ1A5X6 159 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 OR10AG1Q8NH19 301 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 C12orf57Q99622 126 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 FN1P02751 2386 aaKnown RBP12.39□□□□□ -0.43
CLCF1-201ENST00000312438 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
CLCF1-201ENST00000312438 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
CLCF1-201ENST00000312438 TRAV12-2A0A075B6T6 113 aa12.38□□□□□ -0.43
CLCF1-201ENST00000312438 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
CLCF1-201ENST00000312438 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
CLCF1-201ENST00000312438 U3KQK5 164 aa12.38□□□□□ -0.43
CLCF1-201ENST00000312438 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 PF4P02776 101 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 SAMD10Q9BYL1 202 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
CLCF1-201ENST00000312438 RAB4AP20338 218 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 ZNF124Q15973 351 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 MRPL51Q4U2R6 128 aaKnown RBP12.37□□□□□ -0.43
CLCF1-201ENST00000312438 NIT1Q86X76 327 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.37□□□□□ -0.43
CLCF1-201ENST00000312438 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
CLCF1-201ENST00000312438 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
CLCF1-201ENST00000312438 ODF3L2Q3SX64 289 aa12.36□□□□□ -0.43
CLCF1-201ENST00000312438 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
CLCF1-201ENST00000312438 OR11H12B2RN74 326 aa12.35□□□□□ -0.43
CLCF1-201ENST00000312438 D6R8Y8 96 aa12.35□□□□□ -0.43
CLCF1-201ENST00000312438 PYY3Q5JQD4 70 aa12.35□□□□□ -0.43
CLCF1-201ENST00000312438 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
CLCF1-201ENST00000312438 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
CLCF1-201ENST00000312438 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
CLCF1-201ENST00000312438 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 PPBPP02775 128 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 CD7P09564 240 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 EVI2AP22794 236 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 CKS2P33552 79 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
CLCF1-201ENST00000312438 HSBP1O75506 76 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 LINC00614P0C842 121 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 FXYD7P58549 80 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
CLCF1-201ENST00000312438 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
CLCF1-201ENST00000312438 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms