RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MRPL16Q9NX20 251 aaKnown RBP7.12□□□□□ -1.27
PTPRE-202ENST00000306042 IL15RAQ13261 267 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 Q6ZPA2 131 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
PTPRE-202ENST00000306042 WI2-2373I1.2A0A1W2PRP0 233 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 PSMB2P49721 201 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 VWC2Q2TAL6 325 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 A0A0J9YY99 117 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 ATP5G1P05496 136 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 ADMP35318 185 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 TRPT1Q86TN4 253 aaKnown RBP7.11□□□□□ -1.27
PTPRE-202ENST00000306042 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 M0R2P5 195 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 LGALS9O00182 355 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 CPAMD8Q8IZJ3 1885 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 EXPH5Q8NEV8 1989 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 PLP1P60201 277 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 TTC32Q5I0X7 151 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 ZNF492Q9P255 531 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 U3KQE9 123 aa7.11□□□□□ -1.27
PTPRE-202ENST00000306042 D6R8Y8 96 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 A0A096LPF7 62 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 BRCA2P51587 3418 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 TRBV25-1A0A075B6N4 114 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
PTPRE-202ENST00000306042 HOXA5P20719 270 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 PSMB8P28062 276 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 HIST2H2BDQ6DRA6 164 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 Q8N6K4 173 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
PTPRE-202ENST00000306042 PLXNB1O43157 2135 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 ZNF726P1Q15940 193 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 DEFB114Q30KQ6 69 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 GNB1LQ9BYB4 327 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 CRYGBP07316 175 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 RHOHQ15669 191 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 PATE2Q6UY27 113 aa7.09□□□□□ -1.27
PTPRE-202ENST00000306042 HBDP02042 147 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 BRWD1-AS2P59051 145 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 LAGE3Q14657 143 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 Q6ZWC4 215 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 C2CD3Q4AC94 2353 aa7.09□□□□□ -1.28
PTPRE-202ENST00000306042 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
PTPRE-202ENST00000306042 SS18Q15532 418 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 Q6ZS46 218 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 OR13C6PQ8NH95 151 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 GFRA4Q9GZZ7 299 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 PRRC2CQ9Y520 2896 aaKnown RBP7.08□□□□□ -1.28
PTPRE-202ENST00000306042 TRANK1O15050 2925 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 DEFB4AO15263 64 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 LYRM7Q5U5X0 104 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 SPRY2O43597 315 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 CKS1BP61024 79 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 AMN1Q8IY45 258 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 DMRT1Q9Y5R6 373 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 RAI1Q7Z5J4 1906 aaPredicted RBP7.08□□□□□ -1.28
PTPRE-202ENST00000306042 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
PTPRE-202ENST00000306042 LINC00614P0C842 121 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 RASL11AQ6T310 242 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 TEX43Q6ZNM6 134 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 RAB37Q96AX2 223 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 M0R143 59 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 GNRH2O43555 120 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 CIDEAO60543 219 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 SEC11AP67812 179 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 IGKV1OR2-108A0A075B7D4 117 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 C14orf177Q52M58 125 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 TRAV13-1A0A0B4J241 112 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 FAM231BA6NCW3 169 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 C12orf57Q99622 126 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
PTPRE-202ENST00000306042 TMEM213A2RRL7 107 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 C5orf52A6NGY3 159 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 P0C879 139 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 CT83Q5H943 113 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 SPATA3Q8NHX4 192 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 TMEM242Q9NWH2 141 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 A6NJY4 79 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 LINC00587B1AMM8 73 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 MRPL23Q16540 153 aaKnown RBP7.06□□□□□ -1.28
PTPRE-202ENST00000306042 TMEM243Q9BU79 118 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
PTPRE-202ENST00000306042 MORN5Q5VZ52 161 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
PTPRE-202ENST00000306042 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 A0A0J9YX75 114 aa7.05□□□□□ -1.28
PTPRE-202ENST00000306042 KLF5Q13887 457 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms