RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 KLLNB2CW77 178 aa16.62■□□□□ 0.25
SMAD1-201ENST00000302085 TWIST1Q15672 202 aa16.62■□□□□ 0.25
SMAD1-201ENST00000302085 MSRB1Q9NZV6 116 aa16.62■□□□□ 0.25
SMAD1-201ENST00000302085 EBLN2Q6P2I7 272 aa16.61■□□□□ 0.25
SMAD1-201ENST00000302085 DYNLRB2Q8TF09 96 aa16.61■□□□□ 0.25
SMAD1-201ENST00000302085 NAGKQ9UJ70 344 aa16.6■□□□□ 0.25
SMAD1-201ENST00000302085 TRAV2A0A0B4J234 112 aa16.6■□□□□ 0.25
SMAD1-201ENST00000302085 FAM104BQ5XKR9 115 aa16.6■□□□□ 0.25
SMAD1-201ENST00000302085 SORL1Q92673 2214 aa16.59■□□□□ 0.25
SMAD1-201ENST00000302085 ANXA2RQ3ZCQ2 193 aa16.59■□□□□ 0.25
SMAD1-201ENST00000302085 ODF3Q96PU9 254 aa16.59■□□□□ 0.25
SMAD1-201ENST00000302085 ADARB2-AS1A8MUL3 147 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 IGKV3-20P01619 116 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 CD300EQ496F6 205 aaPredicted RBP16.58■□□□□ 0.25
SMAD1-201ENST00000302085 FOXI2Q6ZQN5 318 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 AMN1Q8IY45 258 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 KCNS1Q96KK3 526 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 NIT2Q9NQR4 276 aa16.58■□□□□ 0.25
SMAD1-201ENST00000302085 TCF21O43680 179 aa16.58■□□□□ 0.24
SMAD1-201ENST00000302085 LEPP41159 167 aa16.58■□□□□ 0.24
SMAD1-201ENST00000302085 CDPF1Q6NVV7 123 aa16.58■□□□□ 0.24
SMAD1-201ENST00000302085 OR10AG1Q8NH19 301 aa16.58■□□□□ 0.24
SMAD1-201ENST00000302085 SNAI2O43623 268 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 OR5AL1P0C617 328 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 NIT1Q86X76 327 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 URB1-AS1Q96HZ7 61 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 SETD2Q9BYW2 2564 aaPredicted RBP16.57■□□□□ 0.24
SMAD1-201ENST00000302085 DUSP14O95147 198 aaKnown RBP16.57■□□□□ 0.24
SMAD1-201ENST00000302085 DEFB131AP59861 70 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 SAMD10Q9BYL1 202 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 TMEM191AQ9H0A3 160 aa16.57■□□□□ 0.24
SMAD1-201ENST00000302085 KRTAP10-3P60369 221 aa16.56■□□□□ 0.24
SMAD1-201ENST00000302085 JOSD1Q15040 202 aaPredicted RBP16.56■□□□□ 0.24
SMAD1-201ENST00000302085 U3KQK5 164 aa16.56■□□□□ 0.24
SMAD1-201ENST00000302085 AGRNO00468 2067 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 KNCNA6PVL3 124 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 H3BVH4 76 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 GNRH2O43555 120 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 HIVEP1P15822 2718 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 IGHV4-4A0A075B6R2 117 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 MRPL51Q4U2R6 128 aaKnown RBP16.55■□□□□ 0.24
SMAD1-201ENST00000302085 AMTNQ6UX39 209 aa16.55■□□□□ 0.24
SMAD1-201ENST00000302085 C7orf71A4D174 169 aa16.54■□□□□ 0.24
SMAD1-201ENST00000302085 ZNF324O75467 553 aaPredicted RBP16.54■□□□□ 0.24
SMAD1-201ENST00000302085 DMRTA1Q5VZB9 504 aa16.54■□□□□ 0.24
SMAD1-201ENST00000302085 Q6ZWC4 215 aa16.54■□□□□ 0.24
SMAD1-201ENST00000302085 FN1P02751 2386 aaKnown RBP16.53■□□□□ 0.24
SMAD1-201ENST00000302085 TRAV12-3A0A0B4J271 114 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 M0R2Z0 102 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 PMCHP20382 165 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 RNASEKQ6P5S7 137 aaKnown RBP16.53■□□□□ 0.24
SMAD1-201ENST00000302085 FAM19A2Q8N3H0 131 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 RNF185Q96GF1 192 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 SIGLEC8Q9NYZ4 499 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 SETXQ7Z333 2677 aaKnown RBP16.53■□□□□ 0.24
SMAD1-201ENST00000302085 D6R8Y8 96 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 CRLF1O75462 422 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 ASIPP42127 132 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 AMTP48728 403 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 NSUN5P1Q3KNT7 163 aa16.53■□□□□ 0.24
SMAD1-201ENST00000302085 ZNF256Q9Y2P7 627 aaPredicted RBP16.53■□□□□ 0.24
SMAD1-201ENST00000302085 TIMM8BQ9Y5J9 83 aaPredicted RBP16.53■□□□□ 0.24
SMAD1-201ENST00000302085 TRAV12-2A0A075B6T6 113 aa16.52■□□□□ 0.24
SMAD1-201ENST00000302085 TRAV25A0A0B4J276 109 aa16.52■□□□□ 0.24
SMAD1-201ENST00000302085 RAB4AP20338 218 aa16.52■□□□□ 0.24
SMAD1-201ENST00000302085 CACNG7P62955 275 aa16.52■□□□□ 0.24
SMAD1-201ENST00000302085 ZNF124Q15973 351 aa16.52■□□□□ 0.24
SMAD1-201ENST00000302085 SPAG8Q99932 426 aaPredicted RBP16.52■□□□□ 0.24
SMAD1-201ENST00000302085 WNK1Q9H4A3 2382 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 SPRY2O43597 315 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 TSPOP30536 169 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 CDKN1BP46527 198 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 SPINK13Q1W4C9 94 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 DNLZQ5SXM8 178 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 MAP6D1Q9H9H5 199 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 SPANXN1Q5VSR9 72 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 SCRT2Q9NQ03 307 aa16.51■□□□□ 0.23
SMAD1-201ENST00000302085 NSD1Q96L73 2696 aaPredicted RBP16.5■□□□□ 0.23
SMAD1-201ENST00000302085 OR4C46A6NHA9 309 aa16.5■□□□□ 0.23
SMAD1-201ENST00000302085 A8MTW9 85 aa16.5■□□□□ 0.23
SMAD1-201ENST00000302085 H3BMM0 161 aa16.5■□□□□ 0.23
SMAD1-201ENST00000302085 HLA-DRB4P13762 266 aa16.5■□□□□ 0.23
SMAD1-201ENST00000302085 S100A4P26447 101 aaKnown RBP16.5■□□□□ 0.23
SMAD1-201ENST00000302085 HLA-DRB4X5D2U9 266 aa16.5■□□□□ 0.23
SMAD1-201ENST00000302085 PCP4L1A6NKN8 68 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 HSBP1O75506 76 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 MED14OSP0DP75 135 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 RNASE3P12724 160 aaKnown RBP16.49■□□□□ 0.23
SMAD1-201ENST00000302085 EVI2AP22794 236 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 FAM159AQ6UWV7 190 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 ORMDL3Q8N138 153 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 PRELID3AQ96N28 172 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 SMKR1H3BMG3 65 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 LINC00614P0C842 121 aa16.49■□□□□ 0.23
SMAD1-201ENST00000302085 CKS2P33552 79 aa16.48■□□□□ 0.23
SMAD1-201ENST00000302085 CHCHD1Q96BP2 118 aaKnown RBP16.48■□□□□ 0.23
SMAD1-201ENST00000302085 RBMY1BA6NDE4 496 aaKnown RBP16.47■□□□□ 0.23
SMAD1-201ENST00000302085 RBMY1EA6NEQ0 496 aaKnown RBP16.47■□□□□ 0.23
SMAD1-201ENST00000302085 RBMY1DP0C7P1 496 aaKnown RBP16.47■□□□□ 0.23
SMAD1-201ENST00000302085 FXYD7P58549 80 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms