RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
ABCA3-201ENST00000301732 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
ABCA3-201ENST00000301732 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
ABCA3-201ENST00000301732 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
ABCA3-201ENST00000301732 FXYD5Q96DB9 178 aa9.78□□□□□ -0.84
ABCA3-201ENST00000301732 IGHV4OR15-8A0A075B7B6 117 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 A0A087WW49 117 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 NPBQ8NG41 125 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 RITA1Q96K30 269 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 MINOS1Q5TGZ0 78 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 LYPD1Q8N2G4 141 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 TMEM141Q96I45 108 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 MINOS1-NBL1R4GNA1 71 aa9.77□□□□□ -0.84
ABCA3-201ENST00000301732 F8VRH5 84 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 TRAV4A0A0B4J268 109 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 USMG5Q96IX5 58 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 LINC01619G3V211 115 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 BRWD3Q6RI45 1802 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 A0A1B0GX51 115 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 CDKN1BP46527 198 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
ABCA3-201ENST00000301732 ANKRD39Q53RE8 183 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 LYPD6Q86Y78 171 aa9.77□□□□□ -0.85
ABCA3-201ENST00000301732 IGHG2P01859 326 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 LGALS9CQ6DKI2 356 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 BRK1Q8WUW1 75 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 U3KQE9 123 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
ABCA3-201ENST00000301732 PROP1O75360 226 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 ZNF493Q6ZR52 646 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 A0A0U1RQV1 116 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 CFC1BP0CG36 223 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 CFC1P0CG37 223 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
ABCA3-201ENST00000301732 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
ABCA3-201ENST00000301732 FXYD2P54710 66 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 SCN10AQ9Y5Y9 1956 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 LTAP01374 205 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 VOPP1Q96AW1 172 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 ZNF492Q9P255 531 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 H3BRN7 92 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 CR1LQ2VPA4 569 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 SPTSSBQ8NFR3 76 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 PROK2Q9HC23 129 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 CHKB-CPT1BH3BT56 60 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 FAM231DQ6ZW35 169 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 UTF1Q5T230 341 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 LINC01356Q8N9X3 169 aa9.74□□□□□ -0.85
ABCA3-201ENST00000301732 TCF20Q9UGU0 1960 aaKnown RBP9.73□□□□□ -0.85
ABCA3-201ENST00000301732 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 IGLV3-19P01714 112 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 GRNP28799 593 aaKnown RBP9.73□□□□□ -0.85
ABCA3-201ENST00000301732 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 A0A0G2JMZ2 1700 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 LRRC37AA6NMS7 1700 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 BUB3O43684 328 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 MSMBP08118 114 aa9.73□□□□□ -0.85
ABCA3-201ENST00000301732 TNS1Q9HBL0 1735 aaKnown RBP9.73□□□□□ -0.85
ABCA3-201ENST00000301732 DTX1Q86Y01 620 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 TNRC6BQ9UPQ9 1833 aaKnown RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 ACYP1P07311 99 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 ZFP2Q6ZN57 461 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 IGLV3-9A0A075B6K5 115 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 E9PQ18 207 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 C8orf31Q8N9H6 132 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 A4D1N5 150 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 A0A0J9YXV3 536 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 IGLL5B9A064 214 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 C22orf46C9J442 243 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 IGLC1P0CG04 106 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 SP5Q6BEB4 398 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 ADAMTS7Q9UKP4 1686 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 SLURP1P55000 103 aa9.72□□□□□ -0.85
ABCA3-201ENST00000301732 YPEL3P61236 119 aaPredicted RBP9.72□□□□□ -0.85
ABCA3-201ENST00000301732 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
ABCA3-201ENST00000301732 NRGNQ92686 78 aa9.71□□□□□ -0.85
ABCA3-201ENST00000301732 TRBV6-6A0A0A6YYG2 114 aa9.71□□□□□ -0.85
ABCA3-201ENST00000301732 PDE6HQ13956 83 aa9.71□□□□□ -0.85
ABCA3-201ENST00000301732 ORMDL1Q9P0S3 153 aa9.71□□□□□ -0.85
ABCA3-201ENST00000301732 ZNF833PQ6ZTB9 187 aa9.71□□□□□ -0.86
ABCA3-201ENST00000301732 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
ABCA3-201ENST00000301732 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.86
ABCA3-201ENST00000301732 DKK4Q9UBT3 224 aa9.71□□□□□ -0.86
ABCA3-201ENST00000301732 ZNF883P0CG24 379 aa9.71□□□□□ -0.86
ABCA3-201ENST00000301732 IGHV1-69DA0A0B4J2H0 117 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 IGHV1-69P01742 117 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 SEM1Q6ZVN7 128 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 C1orf147Q96MC9 270 aaPredicted RBP9.7□□□□□ -0.86
ABCA3-201ENST00000301732 TANC2Q9HCD6 1990 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 RLFQ13129 1914 aa9.7□□□□□ -0.86
ABCA3-201ENST00000301732 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms