RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 GATA1P15976 413 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-201ENST00000296302 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 DOCK10Q96BY6 2186 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 MGAMO43451 1857 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 IGHV7-4-1A0A0J9YVY3 117 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 GATA3P23771 443 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
PBRM1-201ENST00000296302 CADP27708 2225 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 RBMY1FQ15415 496 aaKnown RBP8.66□□□□□ -1.02
PBRM1-201ENST00000296302 IGFL3Q6UXB1 125 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 NCOR1O75376 2440 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 CRLF1O75462 422 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 BAALC-AS2P0C853 105 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 FOXE3Q13461 319 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 RUSC1-AS1Q66K80 236 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 CACNA1GO43497 2377 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 FOXI1Q12951 378 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 CR1LQ2VPA4 569 aa8.66□□□□□ -1.02
PBRM1-201ENST00000296302 DOCK7Q96N67 2140 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 IGHV3-38A0A0C4DH36 116 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 SPTAN1Q13813 2472 aaKnown RBP8.65□□□□□ -1.02
PBRM1-201ENST00000296302 H3BUA1 57 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 I3L2K1 104 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 DSCR8Q96T75 97 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 ACACAQ13085 2346 aa8.65□□□□□ -1.02
PBRM1-201ENST00000296302 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.03
PBRM1-201ENST00000296302 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.03
PBRM1-201ENST00000296302 COL4A6Q14031 1691 aa8.65□□□□□ -1.03
PBRM1-201ENST00000296302 LHBP01229 141 aa8.65□□□□□ -1.03
PBRM1-201ENST00000296302 IGKV1-17P01599 117 aa8.65□□□□□ -1.03
PBRM1-201ENST00000296302 ARFGEF3Q5TH69 2177 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 SPTBN2O15020 2390 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 CACNA1HO95180 2353 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 TRBV6-1A0A0K0K1D8 114 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 LINC01619G3V211 115 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 MSMBP08118 114 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 HERV-K104P63124 156 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 LINC01620Q4KN68 170 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 C2orf70A6NJV1 201 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 C22orf46C9J442 243 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 GNRH2O43555 120 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 A4D1N5 150 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
PBRM1-201ENST00000296302 K7EIM0 57 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 IGLV2-14P01704 120 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 FRMD6-AS1P0C7T7 363 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 TCTEX1D4Q5JR98 221 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 Q9H8V8 135 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 LY6DQ14210 128 aa8.63□□□□□ -1.03
PBRM1-201ENST00000296302 E9PLD3 99 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 NXPH4O95158 308 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 TMEM258P61165 79 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 CTRLP40313 264 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 MUSTN1Q8IVN3 82 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ICOSQ9Y6W8 199 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ANAPC1Q9H1A4 1944 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ATOX1O00244 68 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ZFP2Q6ZN57 461 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ORMDL1Q9P0S3 153 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 CTSZQ9UBR2 303 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 FAM215AQ9Y5M1 114 aa8.62□□□□□ -1.03
PBRM1-201ENST00000296302 ODF1Q14990 250 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 RNASE13Q5GAN3 156 aaKnown RBP8.61□□□□□ -1.03
PBRM1-201ENST00000296302 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 A0A0B4J2C4 111 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 IGKV1OR2-108A0A075B7D4 117 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 C19orf71A6NCJ1 209 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 IGFBPL1Q8WX77 278 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 CHD3Q12873 2000 aaKnown RBP8.61□□□□□ -1.03
PBRM1-201ENST00000296302 IGLV11-55A0A075B6I3 123 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 NPBQ8NG41 125 aa8.61□□□□□ -1.03
PBRM1-201ENST00000296302 H0YGX0 51 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
PBRM1-201ENST00000296302 TOMM6Q96B49 74 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 F6UB75 175 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 EML6Q6ZMW3 1958 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 CFHR3Q02985 330 aa8.6□□□□□ -1.03
PBRM1-201ENST00000296302 NOTCH3Q9UM47 2321 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 H3BT86 120 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 YPEL4Q96NS1 127 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 KMT2EQ8IZD2 1858 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 DENND4AQ7Z401 1863 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 TRBV10-2A0A0K0K1G8 114 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms