RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 SPANXN1Q5VSR9 72 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 SIGMAR1Q99720 223 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
SPG7-201ENST00000268704 TRAV26-1A0A087WT03 109 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 ATP5LO75964 103 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 CHD8Q9HCK8 2581 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 SFTA2Q6UW10 78 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
SPG7-201ENST00000268704 SLC50A1Q9BRV3 221 aa13.04□□□□□ -0.32
SPG7-201ENST00000268704 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
SPG7-201ENST00000268704 C11orf71Q6IPW1 123 aa13.04□□□□□ -0.32
SPG7-201ENST00000268704 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
SPG7-201ENST00000268704 H3BMG7 143 aa13.03□□□□□ -0.32
SPG7-201ENST00000268704 AJUBAQ96IF1 538 aa13.03□□□□□ -0.32
SPG7-201ENST00000268704 TM2D2Q9BX73 214 aa13.02□□□□□ -0.32
SPG7-201ENST00000268704 SIRPDQ9H106 197 aa13.02□□□□□ -0.32
SPG7-201ENST00000268704 A0A1W2PPR1 153 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 M0R381 172 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 SAA4P35542 130 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 MINOS1Q5TGZ0 78 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 SMPXQ9UHP9 88 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 MINOS1-NBL1R4GNA1 71 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 A0A087WX48 190 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 ADORA2A-AS1P86434 159 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 C20orf173Q96LM9 149 aa13.02□□□□□ -0.33
SPG7-201ENST00000268704 CKS1BP61024 79 aa13.01□□□□□ -0.33
SPG7-201ENST00000268704 TMEM219Q86XT9 240 aa13.01□□□□□ -0.33
SPG7-201ENST00000268704 METTL26Q96S19 204 aa13.01□□□□□ -0.33
SPG7-201ENST00000268704 OOSP1A8MZH6 123 aa13□□□□□ -0.33
SPG7-201ENST00000268704 IGLL5B9A064 214 aa13□□□□□ -0.33
SPG7-201ENST00000268704 K7ENP7 123 aa13□□□□□ -0.33
SPG7-201ENST00000268704 FBXL19-AS1Q494R0 122 aa13□□□□□ -0.33
SPG7-201ENST00000268704 RPL39LQ96EH5 51 aaKnown RBP13□□□□□ -0.33
SPG7-201ENST00000268704 C16orf92Q96LL3 132 aa13□□□□□ -0.33
SPG7-201ENST00000268704 ATP6V0BQ99437 205 aa13□□□□□ -0.33
SPG7-201ENST00000268704 HIST1H4GQ99525 98 aa13□□□□□ -0.33
SPG7-201ENST00000268704 CUBNO60494 3623 aa13□□□□□ -0.33
SPG7-201ENST00000268704 ZNF479Q96JC4 524 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 CRYBA4P53673 196 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 SRSF1Q07955 248 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■□□ 18.4
SPG7-201ENST00000268704 C12orf74Q32Q52 190 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 SMIM2Q9BVW6 85 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 IGHV3OR16-10A0A075B7F0 116 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 E9PLD3 99 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 C1orf122Q6ZSJ8 110 aa12.99□□□□□ -0.33
SPG7-201ENST00000268704 A0A1B0GV72 72 aa12.98□□□□□ -0.33
SPG7-201ENST00000268704 C9orf47Q6ZRZ4 202 aa12.98□□□□□ -0.33
SPG7-201ENST00000268704 SVIPQ8NHG7 77 aa12.98□□□□□ -0.33
SPG7-201ENST00000268704 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
SPG7-201ENST00000268704 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
SPG7-201ENST00000268704 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
SPG7-201ENST00000268704 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
SPG7-201ENST00000268704 TRBV12-3P01733 135 aa12.97□□□□□ -0.33
SPG7-201ENST00000268704 IGKV3-7A0A075B6H7 116 aa12.97□□□□□ -0.33
SPG7-201ENST00000268704 RASL10AQ92737 203 aa12.97□□□□□ -0.33
SPG7-201ENST00000268704 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 PLNP26678 52 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 UNQ9165/PRO28630Q6UXU0 137 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 FOXI2Q6ZQN5 318 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 GLMPQ8WWB7 406 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 CYSLTR1Q9Y271 337 aa12.96□□□□□ -0.33
SPG7-201ENST00000268704 F8VRH5 84 aa12.96□□□□□ -0.34
SPG7-201ENST00000268704 MGPP08493 103 aa12.96□□□□□ -0.34
SPG7-201ENST00000268704 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.34
SPG7-201ENST00000268704 C20orf78Q9BR46 151 aa12.96□□□□□ -0.34
SPG7-201ENST00000268704 F6UB75 175 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 GATA3P23771 443 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 UBE2E1P51965 193 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
SPG7-201ENST00000268704 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 H7C1H1 209 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
SPG7-201ENST00000268704 SPANXB1Q9NS25 103 aaPredicted RBP12.94□□□□□ -0.34
SPG7-201ENST00000268704 OR11H12B2RN74 326 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 GPHB5Q86YW7 130 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 OR11H2Q8NH07 326 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 U3KQE9 123 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 S100A4P26447 101 aaKnown RBP12.94□□□□□ -0.34
SPG7-201ENST00000268704 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
SPG7-201ENST00000268704 SPG11Q96JI7 2443 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 ABCA2Q9BZC7 2435 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 C5orf56Q8N8D9 126 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 MUC4Q99102 2169 aa12.93□□□□□ -0.34
SPG7-201ENST00000268704 MYMXA0A1B0GTQ4 84 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 RNF223E7ERA6 249 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 ANXA2RQ3ZCQ2 193 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 NEXN-AS1Q8NBZ9 246 aa12.92□□□□□ -0.34
SPG7-201ENST00000268704 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms