RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PKD1L2Q7Z442 2459 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 DYSFO75923 2080 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 FAM106AQ4KMX7 169 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 BPESC1Q9GZL8 116 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 FXYD2P54710 66 aa9.07□□□□□ -0.96
CLSTN3-201ENST00000266546 TRAV8-4A0A0B4J246 113 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 MYMXA0A1B0GTQ4 84 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 F8VRH5 84 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 CD7P09564 240 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 VMO1Q7Z5L0 202 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 TTTY13Q9BZ97 58 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 MRPL36Q9P0J6 103 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 C19orf71A6NCJ1 209 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 SIGLEC15Q6ZMC9 328 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 PPDPFLQ8WWR9 84 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 Q96MF0 132 aa9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 PRRC2AP48634 2157 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-201ENST00000266546 SCGB1A1P11684 91 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 LINC00322Q6ZN03 302 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 Q8N7P7 452 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 RAX2Q96IS3 184 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 C9JAW5 83 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 E7EUB6 86 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 EGR2P11161 476 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 WFDC2Q14508 124 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 Q8N976 141 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 IGLL5B9A064 214 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 GATA3P23771 443 aa9.05□□□□□ -0.96
CLSTN3-201ENST00000266546 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 RRN3P1Q2M238 152 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 NSUN5P1Q3KNT7 163 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 FOXI2Q6ZQN5 318 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 IL17RELQ6ZVW7 336 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 REV3LO60673 3130 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 OVOL1O14753 267 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 IGHV3-11P01762 117 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 UBE2E1P51965 193 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 PAX8Q06710 450 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
CLSTN3-201ENST00000266546 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 NDPQ00604 133 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 C11orf71Q6IPW1 123 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 A0A087WX48 190 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
CLSTN3-201ENST00000266546 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 K7EMI3 77 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 HLA-DRB4P13762 266 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 UTF1Q5T230 341 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 MLST8Q9BVC4 326 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.96
CLSTN3-201ENST00000266546 VCYO14598 125 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 HIGD1BQ9P298 99 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 LINC00527Q9UJ94 153 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 TMEM95Q3KNT9 176 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 IGKV1D-37A0A075B6S9 117 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
CLSTN3-201ENST00000266546 NPFFO15130 113 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 DNAL4O96015 105 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 C2orf82Q6UX34 121 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 ACANP16112 2415 aa9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-201ENST00000266546 HLA-DMBP28068 263 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 RITA1Q96K30 269 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 M0R2P5 195 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 CD28P10747 220 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 TMEM219Q86XT9 240 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 LY6G5BQ8NDX9 201 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 TP53TG1Q9Y2A0 90 aa9□□□□□ -0.97
CLSTN3-201ENST00000266546 ZNF48Q96MX3 618 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-201ENST00000266546 I3L2K1 104 aa8.99□□□□□ -0.97
CLSTN3-201ENST00000266546 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
CLSTN3-201ENST00000266546 MSMBP08118 114 aa8.99□□□□□ -0.97
CLSTN3-201ENST00000266546 LINC01356Q8N9X3 169 aa8.99□□□□□ -0.97
CLSTN3-201ENST00000266546 TNFRSF13BO14836 293 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms