RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SPRY2O43597 315 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 MT-ND4LP03901 98 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 HTN1P15515 57 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 FAM231DQ6ZW35 169 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 C1orf158Q8N1D5 194 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 C15orf54Q8N8G6 183 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 CSTL1Q9H114 145 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 TP53TG3Q9ULZ0 132 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 TMEM189A5PLL7 270 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 B4DEV8 164 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 K7EIL1 84 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 TCL1AP56279 114 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 NUTF2P61970 127 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 RHEBQ15382 184 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 TMEM88Q6PEY1 159 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 CBLN2Q8IUK8 224 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 BIN3Q9NQY0 253 aa7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 ZMAT5Q9UDW3 170 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-201ENST00000263694 H7BYZ3 331 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 INSP01308 110 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 FAM3BP58499 235 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 MORN3Q6PF18 240 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 ANAPC16Q96DE5 110 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 LINC01587Q99440 93 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 URGCP-MRPS24S4R325 110 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 A0A087WWC5 75 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 MUC21A0A0G2JKD1 596 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 MUC21A0A140T8X8 626 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 FRMD6-AS1P0C7T7 363 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 AZU1P20160 251 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 SSTP61278 116 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 TIMM8BQ9Y5J9 83 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-201ENST00000263694 IGHV1OR15-1A0A075B7D0 117 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 AMBPP02760 352 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 TYMSP04818 313 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 DEFB135Q30KP9 77 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 FAM159AQ6UWV7 190 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 IL36BQ9NZH7 164 aa7.07□□□□□ -1.28
SNRNP40-201ENST00000263694 MUC4Q99102 2169 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 PPP1R2P9O14990 202 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 SPINK4O60575 86 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 TSKUQ8WUA8 353 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 PGLYRP4Q96LB8 373 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 NEU1Q99519 415 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 TPPP3Q9BW30 176 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 MDFICQ9P1T7 246 aa7.06□□□□□ -1.28
SNRNP40-201ENST00000263694 KIR2DL5BA0A0G2JN68 375 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 KIR2DL5BA0A0G2JPC4 375 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 SMIM27A0A1W2PRY6 76 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 CBY3A6NI87 242 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 A8MWL6 223 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 A8MZ25 164 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 H3BVH4 76 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 APOC4P55056 127 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 KIR2DL5AQ8N109 375 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 KIR2DL5BQ8NHK3 375 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 C1QTNF4Q9BXJ3 329 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 RETNQ9HD89 108 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 TMEM242Q9NWH2 141 aa7.05□□□□□ -1.28
SNRNP40-201ENST00000263694 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 RNASE3P12724 160 aaKnown RBP7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 TDRG1Q3Y452 100 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 CT83Q5H943 113 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 LYZL1Q6UWQ5 148 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 MRAPQ8TCY5 172 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 C20orf144Q9BQM9 153 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 PYGO2Q9BRQ0 406 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 GOLT1BQ9Y3E0 138 aa7.04□□□□□ -1.28
SNRNP40-201ENST00000263694 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 IGHV3-16A0A0C4DH30 117 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 A0A1W2PPQ1 181 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 CXCL1P09341 107 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 ARMS2P0C7Q2 107 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 IGLC6P0CF74 106 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 ASIPP42127 132 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 ZNF705AQ6ZN79 300 aaPredicted RBP7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 FER1L6-AS1Q8NA97 138 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 KCNS1Q96KK3 526 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 GSN-AS1Q9NRJ2 163 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 SMCO4Q9NRQ5 59 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 XKRY2A2RUG3 117 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 S100A4P26447 101 aaKnown RBP7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 ELOBQ15370 118 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 MRPL54Q6P161 138 aaKnown RBP7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 SBSPONQ8IVN8 264 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 YPEL4Q96NS1 127 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 NAT8BQ9UHF3 227 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms