RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 ZFP36P26651 326 aaKnown RBP9.98□□□□□ -0.81
SNX1-201ENST00000261889 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 U3KQK5 164 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 H7C2G1 150 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 DPM2O94777 84 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 VMO1Q7Z5L0 202 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 CLUHP3Q96NS8 147 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 ABCA12Q86UK0 2595 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 ATP6V0E1O15342 81 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 CD300EQ496F6 205 aaPredicted RBP9.98□□□□□ -0.81
SNX1-201ENST00000261889 JPT2Q9H910 190 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 KAAG1Q9UBP8 84 aa9.98□□□□□ -0.81
SNX1-201ENST00000261889 TRBV12-3P01733 135 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 UBTD1Q9HAC8 227 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 LY6LH3BQJ8 138 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 EDN2P20800 178 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 CEND1Q8N111 149 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 IGLL5B9A064 214 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 Q6AWC8 147 aa9.97□□□□□ -0.81
SNX1-201ENST00000261889 SPAG8Q99932 426 aaPredicted RBP9.97□□□□□ -0.81
SNX1-201ENST00000261889 PKD1L2Q7Z442 2459 aa9.96□□□□□ -0.81
SNX1-201ENST00000261889 IGHV7-81A0A0B4J1V7 117 aa9.96□□□□□ -0.81
SNX1-201ENST00000261889 A0A1B0GWB2 263 aa9.96□□□□□ -0.81
SNX1-201ENST00000261889 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.81
SNX1-201ENST00000261889 CCDC168Q8NDH2 2452 aa9.96□□□□□ -0.82
SNX1-201ENST00000261889 BMI1P35226 326 aa9.96□□□□□ -0.82
SNX1-201ENST00000261889 C12orf74Q32Q52 190 aa9.96□□□□□ -0.82
SNX1-201ENST00000261889 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
SNX1-201ENST00000261889 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.82
SNX1-201ENST00000261889 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
SNX1-201ENST00000261889 SRSF8Q9BRL6 282 aaKnown RBP9.95□□□□□ -0.82
SNX1-201ENST00000261889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.95□□□□□ -0.82
SNX1-201ENST00000261889 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
SNX1-201ENST00000261889 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
SNX1-201ENST00000261889 GNRH2O43555 120 aa9.95□□□□□ -0.82
SNX1-201ENST00000261889 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
SNX1-201ENST00000261889 EPG5Q9HCE0 2579 aa9.95□□□□□ -0.82
SNX1-201ENST00000261889 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 IGSF10Q6WRI0 2623 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 B9A039 149 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 BRD3OSQ6XYD6 125 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 A0A1B0GW15 77 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 C20orf173Q96LM9 149 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 NF1P21359 2839 aa9.94□□□□□ -0.82
SNX1-201ENST00000261889 A0A087WWL8 130 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 PSMB2P49721 201 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 LY6EQ16553 131 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 C8orf31Q8N9H6 132 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 C16orf92Q96LL3 132 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 RAB1BQ9H0U4 201 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
SNX1-201ENST00000261889 LAGE3Q14657 143 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 UNQ9165/PRO28630Q6UXU0 137 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 C8orf86Q6ZUL3 223 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 CCDC140Q96MF4 163 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 OPRPNQ99935 248 aaPredicted RBP9.93□□□□□ -0.82
SNX1-201ENST00000261889 SPANXB1Q9NS25 103 aaPredicted RBP9.93□□□□□ -0.82
SNX1-201ENST00000261889 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
SNX1-201ENST00000261889 NAV2Q8IVL1 2488 aa9.93□□□□□ -0.82
SNX1-201ENST00000261889 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 BUB3O43684 328 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 SLC25A16P16260 332 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNX1-201ENST00000261889 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 CCDC144NLQ6NUI1 221 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 ABCA2Q9BZC7 2435 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 CFAP46Q8IYW2 2715 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 TRAV8-2A0A0B4J237 113 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 A0A1W2PPR1 153 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
SNX1-201ENST00000261889 NRACQ8N912 160 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 IGHV7-4-1A0A0J9YVY3 117 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 TTC9CQ8N5M4 171 aa9.92□□□□□ -0.82
SNX1-201ENST00000261889 MUC4Q99102 2169 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 HTN1P15515 57 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 PDE6HQ13956 83 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 LY6DQ14210 128 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 DPF1Q92782 380 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 NXT2Q9NPJ8 142 aaKnown RBP9.91□□□□□ -0.82
SNX1-201ENST00000261889 CLPSL1A2RUU4 121 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 RPS20P60866 119 aaKnown RBP9.91□□□□□ -0.82
SNX1-201ENST00000261889 ANXA2RQ3ZCQ2 193 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 SIGMAR1Q99720 223 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 LRRK2Q5S007 2527 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 IGLV2-18A0A075B6J9 118 aa9.91□□□□□ -0.82
SNX1-201ENST00000261889 ZNF815PA8K554 130 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms