RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PTH2Q96A98 100 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 NDUFS8O00217 210 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 APOMO95445 188 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 RAB9AP51151 201 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 COX8CQ7Z4L0 72 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 RPL39LQ96EH5 51 aaKnown RBP12.21□□□□□ -0.45
LMNB1-201ENST00000261366 SPTBN4Q9H254 2564 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 HLA-DRB4P13762 266 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 NPBQ8NG41 125 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 ATP6V0BQ99437 205 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 HLA-DRB4X5D2U9 266 aa12.21□□□□□ -0.45
LMNB1-201ENST00000261366 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 IGHV7-4-1A0A0J9YVY3 117 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 G3V318 75 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 MGPP08493 103 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
LMNB1-201ENST00000261366 KLHL30-AS1Q8NEE0 82 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 PSMB2P49721 201 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 GLMPQ8WWB7 406 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 MYMXA0A1B0GTQ4 84 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 LINC01549A6NIU2 74 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 BUB3O43684 328 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 CKS1BP61024 79 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
LMNB1-201ENST00000261366 C14orf178Q8N769 122 aaPredicted RBP12.2□□□□□ -0.46
LMNB1-201ENST00000261366 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 RAXQ9Y2V3 346 aa12.2□□□□□ -0.46
LMNB1-201ENST00000261366 A0A1B0GV72 72 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
LMNB1-201ENST00000261366 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 LINC01548A6NM66 108 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 F8VRH5 84 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 PLNP26678 52 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 PRR9Q5T870 116 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 SYT8Q8NBV8 401 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
LMNB1-201ENST00000261366 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 H7C1H1 209 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 MORN3Q6PF18 240 aaPredicted RBP12.18□□□□□ -0.46
LMNB1-201ENST00000261366 VMO1Q7Z5L0 202 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 PRO0461Q9UI25 63 aa12.18□□□□□ -0.46
LMNB1-201ENST00000261366 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
LMNB1-201ENST00000261366 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
LMNB1-201ENST00000261366 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
LMNB1-201ENST00000261366 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
LMNB1-201ENST00000261366 SLC25A16P16260 332 aa12.17□□□□□ -0.46
LMNB1-201ENST00000261366 OR11H6Q8NGC7 330 aa12.17□□□□□ -0.46
LMNB1-201ENST00000261366 TRAV8-2A0A0B4J237 113 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 C8orf86Q6ZUL3 223 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 SPATA25Q9BR10 227 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 ATP6V0E1O15342 81 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 C16orf92Q96LL3 132 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 ZFAND3Q9H8U3 227 aa12.16□□□□□ -0.46
LMNB1-201ENST00000261366 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
LMNB1-201ENST00000261366 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.46
LMNB1-201ENST00000261366 PSMG4Q5JS54 123 aa12.15□□□□□ -0.46
LMNB1-201ENST00000261366 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
LMNB1-201ENST00000261366 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.46
LMNB1-201ENST00000261366 ZNF48Q96MX3 618 aaPredicted RBP12.15□□□□□ -0.46
LMNB1-201ENST00000261366 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
LMNB1-201ENST00000261366 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
LMNB1-201ENST00000261366 SMCPP49901 116 aaPredicted RBP12.14□□□□□ -0.47
LMNB1-201ENST00000261366 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
LMNB1-201ENST00000261366 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
LMNB1-201ENST00000261366 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
LMNB1-201ENST00000261366 RPL11P62913 178 aaKnown RBP12.14□□□□□ -0.47
LMNB1-201ENST00000261366 TAL2Q16559 108 aa12.14□□□□□ -0.47
LMNB1-201ENST00000261366 ARL3P36405 182 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 FOXI1Q12951 378 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 RASL10AQ92737 203 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 MT-ATP8P03928 68 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 PRTN3P24158 256 aa12.13□□□□□ -0.47
LMNB1-201ENST00000261366 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
LMNB1-201ENST00000261366 SCGB1A1P11684 91 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 Q8N9W7 124 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 BAALCQ8WXS3 180 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 SLC50A1Q9BRV3 221 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 F6UB75 175 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 FHL3Q13643 280 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 TIMD4Q96H15 378 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 PHLDA3Q9Y5J5 127 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 METTL26Q96S19 204 aa12.12□□□□□ -0.47
LMNB1-201ENST00000261366 DUSP14O95147 198 aaKnown RBP12.11□□□□□ -0.47
LMNB1-201ENST00000261366 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
LMNB1-201ENST00000261366 DLX4Q92988 240 aaPredicted RBP12.11□□□□□ -0.47
LMNB1-201ENST00000261366 C20orf173Q96LM9 149 aa12.11□□□□□ -0.47
LMNB1-201ENST00000261366 GNRH2O43555 120 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms