RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RIF1Q5UIP0 2472 aaKnown RBP9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV4-30-2A0A087WSY4 118 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 ESM1Q9NQ30 184 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV4-61A0A0C4DH41 118 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 INAFM2P0DMQ5 153 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 PIP4P1Q86T03 277 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 AGPAT4-IT1Q9H0P7 198 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 ACACAQ13085 2346 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 RHOHQ15669 191 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGHG4P01861 327 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 CACNA1DQ01668 2161 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 DKK4Q9UBT3 224 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 KLF2Q9Y5W3 355 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-201ENST00000261037 F8VRH5 84 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV3-33P01772 117 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
COL8A1-201ENST00000261037 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 K7EP34 96 aa9.48□□□□□ -0.89
COL8A1-201ENST00000261037 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 FGF23Q9GZV9 251 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-201ENST00000261037 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 IGLV3-1P01715 115 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PRR20EP86478 221 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PRR20CP86479 221 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PRR20DP86480 221 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PRR20BP86481 221 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PRR20AP86496 221 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 PLXND1Q9Y4D7 1925 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 H3BMG7 143 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 ETDBQ3ZM63 59 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 NPSP0C0P6 89 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 Q9H8V8 135 aa9.47□□□□□ -0.89
COL8A1-201ENST00000261037 H3BUA1 57 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 NBL1P41271 181 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 WIPF2Q8TF74 440 aaPredicted RBP9.46□□□□□ -0.89
COL8A1-201ENST00000261037 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 GPR179Q6PRD1 2367 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 A0A1W2PPM0 123 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 AMTNQ6UX39 209 aa9.46□□□□□ -0.89
COL8A1-201ENST00000261037 C15orf53Q8NAA6 179 aa9.46□□□□□ -0.9
COL8A1-201ENST00000261037 CENPVL3A0A0U1RRI6 287 aa9.46□□□□□ -0.9
COL8A1-201ENST00000261037 BLCAPP62952 87 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 BOD1L2Q8IYS8 172 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 GYPEP15421 78 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 UTF1Q5T230 341 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 PIFOQ8TCI5 191 aa9.45□□□□□ -0.9
COL8A1-201ENST00000261037 GP9P14770 177 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 C11orf52Q96A22 123 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 SLX1AQ9BQ83 275 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 KMT2EQ8IZD2 1858 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 F8W1H4 67 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 IGHV7-81A0A0B4J1V7 117 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 C10orf91Q5T1B1 145 aa9.44□□□□□ -0.9
COL8A1-201ENST00000261037 BUB3O43684 328 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 K7EQD1 137 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 A0A087WW49 117 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 K7EMI3 77 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 C9orf66Q5T8R8 295 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 PCP2Q8IVA1 136 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 K7EP13 123 aa9.43□□□□□ -0.9
COL8A1-201ENST00000261037 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 DEFB4AO15263 64 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 Q6ZVH6 145 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 I3L2K1 104 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 SRSF2Q01130 221 aaKnown RBP9.42□□□□□ -0.9
COL8A1-201ENST00000261037 IFITM1P13164 125 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 POU2AF1Q16633 256 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 C8orf31Q8N9H6 132 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 NPBQ8NG41 125 aa9.42□□□□□ -0.9
COL8A1-201ENST00000261037 INTS1Q8N201 2190 aaKnown RBP9.41□□□□□ -0.9
COL8A1-201ENST00000261037 ZNF493Q6ZR52 646 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 MSRB1Q9NZV6 116 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
COL8A1-201ENST00000261037 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
COL8A1-201ENST00000261037 NCR3O14931 201 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 CDPF1Q6NVV7 123 aa9.41□□□□□ -0.9
COL8A1-201ENST00000261037 ADORA2A-AS1P86434 159 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
COL8A1-201ENST00000261037 CRYBA4P53673 196 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 POLEQ07864 2286 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 DEFB1P60022 68 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms