RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ZNF705GA8MUZ8 300 aaPredicted RBP15.06■□□□□ 0
RTCA-201ENST00000260563 SPRY2O43597 315 aa15.06■□□□□ 0
RTCA-201ENST00000260563 GATCO43716 136 aaKnown RBP15.06■□□□□ 0
RTCA-201ENST00000260563 INSP01308 110 aa15.06■□□□□ 0
RTCA-201ENST00000260563 Q6ZQT7 251 aa15.06■□□□□ 0
RTCA-201ENST00000260563 CTDSP1Q9GZU7 261 aa15.06■□□□□ 0
RTCA-201ENST00000260563 V9GYV3 84 aa15.06■□□□□ 0
RTCA-201ENST00000260563 CSNK1G2-AS1Q8NCQ2 148 aa15.05■□□□□ -0
RTCA-201ENST00000260563 OVOL2Q9BRP0 275 aa15.05■□□□□ -0
RTCA-201ENST00000260563 RPP21Q9H633 154 aaKnown RBP15.05■□□□□ -0
RTCA-201ENST00000260563 H7BYZ3 331 aa15.04■□□□□ -0
RTCA-201ENST00000260563 ZNF324O75467 553 aaPredicted RBP15.04■□□□□ -0
RTCA-201ENST00000260563 TMEM242Q9NWH2 141 aa15.04■□□□□ -0
RTCA-201ENST00000260563 COL7A1Q02388 2944 aa15.03■□□□□ -0
RTCA-201ENST00000260563 ORM1P02763 201 aa15.03■□□□□ -0
RTCA-201ENST00000260563 TMEM189A5PLL7 270 aa15.02■□□□□ -0
RTCA-201ENST00000260563 RPL19P84098 196 aaKnown RBP15.02■□□□□ -0
RTCA-201ENST00000260563 LINC01559Q495D7 138 aa15.02■□□□□ -0
RTCA-201ENST00000260563 OR2D3Q8NGH3 330 aa15.02■□□□□ -0
RTCA-201ENST00000260563 C11orf21Q9P2W6 132 aa15.02■□□□□ -0
RTCA-201ENST00000260563 GOLT1BQ9Y3E0 138 aa15.02■□□□□ -0
RTCA-201ENST00000260563 NBEAL2Q6ZNJ1 2754 aa15.02□□□□□ -0.01
RTCA-201ENST00000260563 RBMY1A1P0DJD3 496 aaKnown RBP15.02□□□□□ -0.01
RTCA-201ENST00000260563 RBMY1CP0DJD4 496 aa15.02□□□□□ -0.01
RTCA-201ENST00000260563 RBMY1FQ15415 496 aaKnown RBP15.02□□□□□ -0.01
RTCA-201ENST00000260563 CT83Q5H943 113 aa15.02□□□□□ -0.01
RTCA-201ENST00000260563 C20orf144Q9BQM9 153 aa15.02□□□□□ -0.01
RTCA-201ENST00000260563 NAGKQ9UJ70 344 aa15.02□□□□□ -0.01
RTCA-201ENST00000260563 IGHV3OR16-12A0A075B7B8 117 aa15.01□□□□□ -0.01
RTCA-201ENST00000260563 IGKV3D-20A0A0C4DH25 116 aa15.01□□□□□ -0.01
RTCA-201ENST00000260563 OR11H2Q8NH07 326 aa15.01□□□□□ -0.01
RTCA-201ENST00000260563 TMEM208Q9BTX3 173 aa15.01□□□□□ -0.01
RTCA-201ENST00000260563 TMSB15BA0A087X1C1 80 aa15□□□□□ -0.01
RTCA-201ENST00000260563 SCO1O75880 301 aa15□□□□□ -0.01
RTCA-201ENST00000260563 MUC21Q5SSG8 566 aa15□□□□□ -0.01
RTCA-201ENST00000260563 FAM159AQ6UWV7 190 aa15□□□□□ -0.01
RTCA-201ENST00000260563 ZNF705AQ6ZN79 300 aaPredicted RBP15□□□□□ -0.01
RTCA-201ENST00000260563 ANXA2RQ3ZCQ2 193 aa14.99□□□□□ -0.01
RTCA-201ENST00000260563 C1orf158Q8N1D5 194 aa14.99□□□□□ -0.01
RTCA-201ENST00000260563 IL36BQ9NZH7 164 aa14.99□□□□□ -0.01
RTCA-201ENST00000260563 TENM3Q9P273 2699 aa14.99□□□□□ -0.01
RTCA-201ENST00000260563 XKRY2A2RUG3 117 aa14.98□□□□□ -0.01
RTCA-201ENST00000260563 A8MWL6 223 aa14.98□□□□□ -0.01
RTCA-201ENST00000260563 RPS20P60866 119 aaKnown RBP14.98□□□□□ -0.01
RTCA-201ENST00000260563 TMEM256Q8N2U0 113 aa14.98□□□□□ -0.01
RTCA-201ENST00000260563 TSKUQ8WUA8 353 aa14.98□□□□□ -0.01
RTCA-201ENST00000260563 U3KQK5 164 aa14.98□□□□□ -0.01
RTCA-201ENST00000260563 CXorf65A6NEN9 183 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 KCNS1Q96KK3 526 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 IGHV1OR15-1A0A075B7D0 117 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 GZMBP10144 247 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 TDRG1Q3Y452 100 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 TMEM88Q6PEY1 159 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 ZNF575Q86XF7 245 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 CBLN2Q8IUK8 224 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 IMMP2LQ96T52 175 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 LINC01587Q99440 93 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 SMCO4Q9NRQ5 59 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 X6R8D5 127 aa14.97□□□□□ -0.01
RTCA-201ENST00000260563 SMIM27A0A1W2PRY6 76 aa14.96□□□□□ -0.02
RTCA-201ENST00000260563 GFRA4Q9GZZ7 299 aa14.96□□□□□ -0.02
RTCA-201ENST00000260563 GRIFINA4D1Z8 144 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 TYMSP04818 313 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 MIFP14174 115 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 TCL1AP56279 114 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 GTSF1Q8WW33 167 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 NEU1Q99519 415 aa14.95□□□□□ -0.02
RTCA-201ENST00000260563 FAM231BA6NCW3 169 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 CXCL1P09341 107 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 S100PP25815 95 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 KCNIP4Q6PIL6 250 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 LINC00467Q9BRT7 94 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 URGCP-MRPS24S4R325 110 aa14.94□□□□□ -0.02
RTCA-201ENST00000260563 SMIM9A6NGZ8 99 aa14.93□□□□□ -0.02
RTCA-201ENST00000260563 GNRH2O43555 120 aa14.93□□□□□ -0.02
RTCA-201ENST00000260563 FAM3BP58499 235 aaPredicted RBP14.93□□□□□ -0.02
RTCA-201ENST00000260563 NAT8BQ9UHF3 227 aa14.93□□□□□ -0.02
RTCA-201ENST00000260563 TP53TG3Q9ULZ0 132 aa14.93□□□□□ -0.02
RTCA-201ENST00000260563 CBY3A6NI87 242 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 HIGD1CA8MV81 97 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 TGP01266 2768 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 HTN1P15515 57 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 ASIPP42127 132 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 FOXA3P55318 350 aaPredicted RBP14.92□□□□□ -0.02
RTCA-201ENST00000260563 RRN3P1Q2M238 152 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 Q8NAQ8 132 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 IGHV4-28A0A0C4DH34 117 aa14.92□□□□□ -0.02
RTCA-201ENST00000260563 TRGV11A0A075B6L2 103 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 A0A1W2PPQ1 181 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 IGLC6P0CF74 106 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 DNLZQ5SXM8 178 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 FER1L6-AS1Q8NA97 138 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 NUP35Q8NFH5 326 aa14.91□□□□□ -0.02
RTCA-201ENST00000260563 C11orf68Q9H3H3 251 aaKnown RBP14.91□□□□□ -0.02
RTCA-201ENST00000260563 A0A0J9YWU9 116 aa14.9□□□□□ -0.02
RTCA-201ENST00000260563 S100A4P26447 101 aaKnown RBP14.9□□□□□ -0.02
RTCA-201ENST00000260563 ELOBQ15370 118 aa14.9□□□□□ -0.02
RTCA-201ENST00000260563 PGLYRP4Q96LB8 373 aa14.9□□□□□ -0.02
RTCA-201ENST00000260563 TPPP3Q9BW30 176 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms