RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 UBE2CO00762 179 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 APCSP02743 223 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 PF4P02776 101 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 ZNF124Q15973 351 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
HDHD3-201ENST00000238379 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 A0A1B0GW15 77 aa11.27□□□□□ -0.61
HDHD3-201ENST00000238379 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
HDHD3-201ENST00000238379 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
HDHD3-201ENST00000238379 M0R2Z0 102 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 HOXA5P20719 270 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 TSPOP30536 169 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 CDKN1BP46527 198 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
HDHD3-201ENST00000238379 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
HDHD3-201ENST00000238379 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 MUC21A0A140T8X8 626 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 C7orf71A4D174 169 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 F2Z2F3 143 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
HDHD3-201ENST00000238379 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 NAGKQ9UJ70 344 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 S100A8P05109 93 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
HDHD3-201ENST00000238379 MAST4O15021 2626 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
HDHD3-201ENST00000238379 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
HDHD3-201ENST00000238379 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
HDHD3-201ENST00000238379 NTF3P20783 257 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 SSTP61278 116 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 VWFP04275 2813 aa11.24□□□□□ -0.61
HDHD3-201ENST00000238379 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
HDHD3-201ENST00000238379 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
HDHD3-201ENST00000238379 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
HDHD3-201ENST00000238379 SNAI2O43623 268 aa11.23□□□□□ -0.61
HDHD3-201ENST00000238379 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
HDHD3-201ENST00000238379 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 GNRH2O43555 120 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 SRIP30626 198 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 TWIST1Q15672 202 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 TP53TG3Q9ULZ0 132 aa11.22□□□□□ -0.61
HDHD3-201ENST00000238379 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.61
HDHD3-201ENST00000238379 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
HDHD3-201ENST00000238379 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
HDHD3-201ENST00000238379 Q0VG73 95 aa11.21□□□□□ -0.61
HDHD3-201ENST00000238379 TDRG1Q3Y452 100 aa11.21□□□□□ -0.61
HDHD3-201ENST00000238379 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.61
HDHD3-201ENST00000238379 OR10AG1Q8NH19 301 aa11.21□□□□□ -0.61
HDHD3-201ENST00000238379 ALKBH7Q9BT30 221 aaPredicted RBP11.21□□□□□ -0.61
HDHD3-201ENST00000238379 H3BVH4 76 aa11.21□□□□□ -0.62
HDHD3-201ENST00000238379 ASIPP42127 132 aa11.21□□□□□ -0.62
HDHD3-201ENST00000238379 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.62
HDHD3-201ENST00000238379 FXYD7P58549 80 aa11.21□□□□□ -0.62
HDHD3-201ENST00000238379 KCNS1Q96KK3 526 aa11.21□□□□□ -0.62
HDHD3-201ENST00000238379 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.62
HDHD3-201ENST00000238379 IGHV4-4A0A075B6R2 117 aa11.2□□□□□ -0.62
HDHD3-201ENST00000238379 CD7P09564 240 aa11.2□□□□□ -0.62
HDHD3-201ENST00000238379 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
HDHD3-201ENST00000238379 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
HDHD3-201ENST00000238379 C19orf73Q9NVV2 129 aa11.2□□□□□ -0.62
HDHD3-201ENST00000238379 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
HDHD3-201ENST00000238379 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
HDHD3-201ENST00000238379 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
HDHD3-201ENST00000238379 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 INSL3P51460 131 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 LINC00310P59036 64 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 CACNG7P62955 275 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
HDHD3-201ENST00000238379 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
HDHD3-201ENST00000238379 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
HDHD3-201ENST00000238379 NUPR1O60356 82 aa11.18□□□□□ -0.62
HDHD3-201ENST00000238379 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
HDHD3-201ENST00000238379 STHQ8IWL8 128 aa11.18□□□□□ -0.62
HDHD3-201ENST00000238379 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
HDHD3-201ENST00000238379 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
HDHD3-201ENST00000238379 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
HDHD3-201ENST00000238379 AKR1D1P51857 326 aa11.17□□□□□ -0.62
HDHD3-201ENST00000238379 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
HDHD3-201ENST00000238379 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
HDHD3-201ENST00000238379 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms