RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 LSM4Q9Y4Z0 139 aaKnown RBP6.19□□□□□ -1.42
NANOG-201ENST00000229307 TLN1Q9Y490 2541 aaKnown RBP6.19□□□□□ -1.42
NANOG-201ENST00000229307 DNLZQ5SXM8 178 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 DLX4Q92988 240 aaPredicted RBP6.18□□□□□ -1.42
NANOG-201ENST00000229307 IGF2BP2-AS1Q96M15 143 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 NOP10Q9NPE3 64 aaKnown RBP6.18□□□□□ -1.42
NANOG-201ENST00000229307 ICOSQ9Y6W8 199 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 D6R8Y8 96 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 IGKV1-17P01599 117 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 I3L3M4 83 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 MRPL23Q16540 153 aaKnown RBP6.18□□□□□ -1.42
NANOG-201ENST00000229307 PHLDA1Q8WV24 401 aaPredicted RBP6.18□□□□□ -1.42
NANOG-201ENST00000229307 DERL1Q9BUN8 251 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 SSBP2P81877 361 aaPredicted RBP6.18□□□□□ -1.42
NANOG-201ENST00000229307 CDPF1Q6NVV7 123 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 SLC25A34Q6PIV7 304 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 NUP35Q8NFH5 326 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 C1orf159Q96HA4 380 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
NANOG-201ENST00000229307 DYNAPQ8N1N2 210 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 PAM16Q9Y3D7 125 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 DPM2O94777 84 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.17□□□□□ -1.42
NANOG-201ENST00000229307 TMEM170AQ8WVE7 144 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 ARHGAP21Q5T5U3 1957 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
NANOG-201ENST00000229307 LINC01006Q8NI28 216 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 SPRY2O43597 315 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 ZNF702PQ9H963 129 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 U3KQE9 123 aa6.17□□□□□ -1.42
NANOG-201ENST00000229307 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 FAM231DQ6ZW35 169 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 ZNRF2Q8NHG8 242 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 TRAV2A0A0B4J234 112 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 IGKV3D-20A0A0C4DH25 116 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 IGHV3-16A0A0C4DH30 117 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 SLC25A20O43772 301 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 TCTAP57738 103 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 AGPAT4-IT1Q9H0P7 198 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 A8MWP6 167 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 NCR2O95944 276 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 ADCYAP1P18509 176 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 A0A087X0K7 114 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 ADMP35318 185 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 FANCD2OSQ96PS1 177 aa6.16□□□□□ -1.42
NANOG-201ENST00000229307 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 K7ERU9 68 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 DNAL4O96015 105 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 C6orf226Q5I0X4 101 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 C5orf30Q96GV9 206 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
NANOG-201ENST00000229307 FREM1Q5H8C1 2179 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 EML6Q6ZMW3 1958 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 F6UB75 175 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 LINC00479Q96M42 142 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 TRBV24-1A0A075B6N3 115 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 UQCR10Q9UDW1 63 aa6.15□□□□□ -1.42
NANOG-201ENST00000229307 SMIM9A6NGZ8 99 aa6.15□□□□□ -1.43
NANOG-201ENST00000229307 IGLV2-14P01704 120 aa6.15□□□□□ -1.43
NANOG-201ENST00000229307 IFI27L1Q96BM0 104 aa6.15□□□□□ -1.43
NANOG-201ENST00000229307 IL15RAQ13261 267 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 DEFB135Q30KP9 77 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 NIT1Q86X76 327 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 C11orf52Q96A22 123 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 DNAJC30Q96LL9 226 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 H7C2G1 150 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 GFI1BQ5VTD9 330 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 TRBV7-9A0A0J9YWB2 115 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 TMEM238C9JI98 176 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 LTAP01374 205 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 IGLL1P15814 213 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 LINC00158P58513 81 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 ABCA1O95477 2261 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 IGKCP01834 107 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 KLF5Q13887 457 aaPredicted RBP6.14□□□□□ -1.43
NANOG-201ENST00000229307 ZNF664Q8N3J9 261 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 MAP6D1Q9H9H5 199 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 USP34Q70CQ2 3546 aa6.14□□□□□ -1.43
NANOG-201ENST00000229307 F8W735 103 aaPredicted RBP6.13□□□□□ -1.43
NANOG-201ENST00000229307 TNFRSF6BO95407 300 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 CRYGBP07316 175 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 A0A1B0GV72 72 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 PLNP26678 52 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 DEFB114Q30KQ6 69 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 CCDC140Q96MF4 163 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 BAHCC1Q9P281 2608 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 A0A0J9YY99 117 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 Q8N6K4 173 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms