RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 TEX48A0A1B0GUV7 120 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 I3L2K1 104 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 PLNP26678 52 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 FXYD2P54710 66 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 CIRBPQ14011 172 aaKnown RBP10.78□□□□□ -0.68
NFKB1-201ENST00000226574 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 NDUFS8O00217 210 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
NFKB1-201ENST00000226574 SHISA9B4DS77 424 aa10.77□□□□□ -0.68
NFKB1-201ENST00000226574 K7EP34 96 aa10.77□□□□□ -0.68
NFKB1-201ENST00000226574 IGLV2-23P01705 113 aa10.77□□□□□ -0.68
NFKB1-201ENST00000226574 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.68
NFKB1-201ENST00000226574 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.68
NFKB1-201ENST00000226574 KLK9Q9UKQ9 250 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 EYSQ5T1H1 3165 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 GNRH2O43555 120 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
NFKB1-201ENST00000226574 HLA-DRB4P13762 266 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 PAX1P15863 534 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 SPINK13Q1W4C9 94 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 C9orf139Q6ZV77 190 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 C1orf159Q96HA4 380 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 MOB4Q9Y3A3 225 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 HLA-DRB4X5D2U9 266 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 C9JAW5 83 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 OVOL1O14753 267 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 UBE2L6O14933 153 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 IGHV3-53P01767 116 aa10.76□□□□□ -0.69
NFKB1-201ENST00000226574 RNASE13Q5GAN3 156 aaKnown RBP10.76□□□□□ -0.69
NFKB1-201ENST00000226574 M0R1W7 72 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 CKS1BP61024 79 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 MINOS1Q5TGZ0 78 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 Q8N8P6 123 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 KLHL30-AS1Q8NEE0 82 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 DLX4Q92988 240 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-201ENST00000226574 MINOS1-NBL1R4GNA1 71 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 TRANK1O15050 2925 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 C10orf142B7Z368 130 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 IGFL3Q6UXB1 125 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 CDKN1BP46527 198 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 MBD6Q96DN6 1003 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 KAAG1Q9UBP8 84 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 ATG2AQ2TAZ0 1938 aa10.75□□□□□ -0.69
NFKB1-201ENST00000226574 TEX22C9J3V5 150 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 ANAPC13Q9BS18 74 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 KLF12Q9Y4X4 402 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 VWC2LB2RUY7 222 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 TSPAN13O95857 204 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 SYNJ2BPP57105 145 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 WFDC2Q14508 124 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
NFKB1-201ENST00000226574 SRSF8Q9BRL6 282 aaKnown RBP10.74□□□□□ -0.69
NFKB1-201ENST00000226574 CTSGP08311 255 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 SPATA12Q7Z6I5 190 aa10.74□□□□□ -0.69
NFKB1-201ENST00000226574 AZU1P20160 251 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 SMIM2Q9BVW6 85 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 TNRC6AQ8NDV7 1962 aaKnown RBP10.73□□□□□ -0.69
NFKB1-201ENST00000226574 TRBV7-1A0A0A6YYK4 115 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 VCYO14598 125 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 CR1LQ2VPA4 569 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 C19orf71A6NCJ1 209 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 SDHAF1A6NFY7 115 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 CTRLP40313 264 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 MGAQ8IWI9 3026 aa10.73□□□□□ -0.69
NFKB1-201ENST00000226574 CENPEQ02224 2701 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 F8VRH5 84 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 IGLV1-47P01700 117 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 CEP192Q8TEP8 1941 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
NFKB1-201ENST00000226574 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
NFKB1-201ENST00000226574 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-201ENST00000226574 CEND1Q8N111 149 aa10.71□□□□□ -0.69
NFKB1-201ENST00000226574 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
NFKB1-201ENST00000226574 GNLYP22749 145 aa10.71□□□□□ -0.69
NFKB1-201ENST00000226574 IGFL2Q6UWQ7 119 aa10.71□□□□□ -0.69
NFKB1-201ENST00000226574 FAM110DQ8TAY7 271 aaPredicted RBP10.71□□□□□ -0.69
NFKB1-201ENST00000226574 DNAL4O96015 105 aa10.71□□□□□ -0.7
NFKB1-201ENST00000226574 OOSP1A8MZH6 123 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 TRGV2A0A075B6R0 118 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 IGHV7-81A0A0B4J1V7 117 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
NFKB1-201ENST00000226574 DSPP15924 2871 aaKnown RBP10.7□□□□□ -0.7
NFKB1-201ENST00000226574 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms