RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
SFXN3-201ENST00000224807 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
SFXN3-201ENST00000224807 ATP5LO75964 103 aa11.08□□□□□ -0.64
SFXN3-201ENST00000224807 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 C15orf32Q32M92 178 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 TMEM78Q5T7P6 136 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 AGPAT4-IT1Q9H0P7 198 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
SFXN3-201ENST00000224807 G3V318 75 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 SRD5A1P18405 259 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 NFE4Q86UQ8 179 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 LYPD1Q8N2G4 141 aa11.07□□□□□ -0.64
SFXN3-201ENST00000224807 F5H697 171 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 GRNP28799 593 aaKnown RBP11.06□□□□□ -0.64
SFXN3-201ENST00000224807 ASCL5Q7RTU5 278 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 Q8N8P6 123 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 TM2D2Q9BX73 214 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 ZFHX3Q15911 3703 aa11.06□□□□□ -0.64
SFXN3-201ENST00000224807 TRBV6-1A0A0K0K1D8 114 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 IGHG4P01861 327 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 PTPRQQ9UMZ3 2332 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 TRBV20-1A0A075B6N2 111 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.05□□□□□ -0.64
SFXN3-201ENST00000224807 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 CTSGP08311 255 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 XGP55808 180 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 RNF183Q96D59 192 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 CHD8Q9HCK8 2581 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 F6UB75 175 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 FOXI1Q12951 378 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 Q1RN00 199 aa11.05□□□□□ -0.64
SFXN3-201ENST00000224807 A0A087WX48 190 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 CEACAM4O75871 244 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.64
SFXN3-201ENST00000224807 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 FHL3Q13643 280 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 C16orf92Q96LL3 132 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 HIGD1BQ9P298 99 aa11.04□□□□□ -0.64
SFXN3-201ENST00000224807 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
SFXN3-201ENST00000224807 LGALS1P09382 135 aaKnown RBP11.03□□□□□ -0.64
SFXN3-201ENST00000224807 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
SFXN3-201ENST00000224807 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 F8VRH5 84 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 TNFRSF13BO14836 293 aaPredicted RBP11.03□□□□□ -0.64
SFXN3-201ENST00000224807 NPC2P61916 151 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 PDE6HQ13956 83 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 PHLDA3Q9Y5J5 127 aa11.03□□□□□ -0.64
SFXN3-201ENST00000224807 H7C1H1 209 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
SFXN3-201ENST00000224807 C2orf66Q6UXQ4 117 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 ZNF575Q86XF7 245 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
SFXN3-201ENST00000224807 MRAP2Q96G30 205 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.65
SFXN3-201ENST00000224807 A0A087WWL8 130 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 B5MCH6 92 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
SFXN3-201ENST00000224807 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
SFXN3-201ENST00000224807 FAM57AQ8TBR7 257 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 JPT2Q9H910 190 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 ZNF292O60281 2723 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 IGHV4-39P01824 125 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 TMEM219Q86XT9 240 aa11.01□□□□□ -0.65
SFXN3-201ENST00000224807 IGLV11-55A0A075B6I3 123 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
SFXN3-201ENST00000224807 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
SFXN3-201ENST00000224807 PRR9Q5T870 116 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
SFXN3-201ENST00000224807 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 GNRH2O43555 120 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 IGHV3-11P01762 117 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 CD3EP07766 207 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 Q6ZS46 218 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 ZMAT4Q9H898 229 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 SHISA9B4DS77 424 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 TSPAN13O95857 204 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 PLNP26678 52 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 TRPT1Q86TN4 253 aaKnown RBP11□□□□□ -0.65
SFXN3-201ENST00000224807 NRACQ8N912 160 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
SFXN3-201ENST00000224807 SPATA25Q9BR10 227 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
SFXN3-201ENST00000224807 CENPEQ02224 2701 aa10.99□□□□□ -0.65
SFXN3-201ENST00000224807 TRBV7-3A0A075B6L6 115 aa10.99□□□□□ -0.65
SFXN3-201ENST00000224807 HTN1P15515 57 aa10.99□□□□□ -0.65
SFXN3-201ENST00000224807 C1QTNF4Q9BXJ3 329 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms