RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm19410A0A140LJC7 2098 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1382Q7TQT3 311 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Q8BG31 207 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr593Q8VF28 327 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr435Q8VFS3 313 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Siglec15A7E1W8 342 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Zfp362B1ASA5 418 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Efna2P52801 209 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Anapc1P53995 1944 aaKnown RBP9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 CortP56469 109 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cd200r4Q6XJV4 270 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Slc25a28Q8R0Z5 364 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Zfp114B2RRA8 586 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr365Q8VFT2 312 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ctag2Q9D9S4 219 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Zfp867E9Q2M4 473 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm10665K7N6B7 321 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Adcyap1O70176 175 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Lrcol1Q3URS3 161 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 NotoQ5TIS6 240 aa9.35□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmem238lA0A1B0GS74 79 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm5615Q3UW02 101 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm21789J3QMZ1 123 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm21870J3QPN2 123 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gm21883J3QPV3 123 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 AsipQ03288 131 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Scrt1Q99M85 348 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 AY761184Q9D848 116 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tmprss5Q9ER04 455 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Gpr35Q9ES90 307 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Hoxa6P09092 232 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr143P34985 313 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cdx4Q07424 282 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 AsmtD3KU66 387 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1116E9PXB8 307 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1333Q7TQV7 317 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 H2-M10.4Q85ZW8 331 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Crispld2Q8BZQ2 495 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr1259Q8VEZ1 309 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Tspo2Q9CRZ8 162 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Prr15Q9D1T5 122 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Josd1Q9DBJ6 202 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Ighv8-9A0A0G2JET1 119 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Thap8E9Q695 213 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 LipiF6YQT7 476 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Olfr279Q8VFD8 310 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Cotl1Q9CQI6 142 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Mrps36Q9CQX8 102 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Fam89bQ9QUI1 189 aa9.34□□□□□ -0.91
Scn8a-203ENSMUST00000108908 Iglv3A0A0B4J1K5 122 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm37797A0A1D5RLC8 261 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Sfrp2P97299 295 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 GfralQ6SJE0 393 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Lipt2Q9D009 231 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Ighv6-4A0A0A6YX19 119 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Olfr1209Q3SXJ3 310 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm11232Q5SPI8 295 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Nup37Q9CWU9 326 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Wnt16Q9QYS1 364 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Pf4Q9Z126 105 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Nlrc5C3VPR6 1915 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Zcchc24B2RVL6 241 aaKnown RBP9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 CebpbP28033 296 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 2210407C18RikQ6YI28 220 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Tcrg-V1P06325 135 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Igsf11P0C673 428 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Olfr275Q7TS18 319 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Nhlrc3Q8CCH2 347 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Adrb3P25962 400 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Mc5rP41149 325 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 HrkP62816 92 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Zfp764E9QAP1 431 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 SellP18337 372 aa9.33□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm6904E9PVF1 202 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm9Q3UKW5 162 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Coq2Q66JT7 374 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Dnase2bQ9QY48 354 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm26920S4R2A5 56 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Trip12G5E870 2025 aaKnown RBP9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 H2-M5A7VMS3 348 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Ren2P00796 401 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 LtaP09225 202 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Pef1Q8BFY6 275 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Acsm5Q8BGA8 578 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 H2afb1Q9CQ70 111 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Bpifa5Q9CQX3 270 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Tnfrsf13cQ9D8D0 175 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Nckap5E9QAE1 1909 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm45736A0A1B0GS18 427 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Vmn1r149E9PWL6 307 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Gm14548E9Q1Z6 680 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Vmn1r101E9Q365 307 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Vmn1r158G3UY92 307 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Psg27Q497W2 474 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Hs3st6Q5GFD5 342 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Trappc1Q5NCF2 145 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Srsf9Q9D0B0 222 aaKnown RBP9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Fam168aQ8BGZ2 244 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Olfr491Q8VG06 310 aa9.32□□□□□ -0.92
Scn8a-203ENSMUST00000108908 Cd74P04441 279 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms