RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Slc25a48Q8BW66 306 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Cdc42ep2Q8JZX9 214 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 PaxxQ8K0Y7 205 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Plppr2Q8VCY8 343 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gp2Q9D733 531 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm10130F6ZHM5 101 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 B2mP01887 119 aa12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Prss3Q792Z0 246 aaKnown RBP12.37□□□□□ -0.43
Nup54-201ENSMUST00000038514 Efnb3O35393 340 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Rpl31P62900 125 aaKnown RBP12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Defb28Q3V2L0 89 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Smim19Q80ZU4 107 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 CstadQ9D245 104 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Mettl9Q9EPL4 318 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Igkv6-15A0A140T8M5 115 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 1500009C09RikD3YYW9 81 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Lbhd2G3UW55 114 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Degs1O09005 323 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Jmjd7P0C872 316 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Sftpa1P35242 248 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Acrv1P50289 261 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Rtl4Q3URY0 304 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Olfr1178Q7TR20 323 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 GgctQ9D7X8 188 aa12.36□□□□□ -0.43
Nup54-201ENSMUST00000038514 Ighv8-9A0A0G2JET1 119 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm21882J3QN86 361 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 H2-DMb2Q31099 261 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Rer1Q9CQU3 196 aaKnown RBP12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Kcnip2Q9JJ69 270 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm7173A0A0G2JEB6 3132 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Bdp1Q571C7 2467 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 MgaA2AWL7 3003 aaKnown RBP12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Znf385cA2A5E6 429 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Tnfrsf17O88472 185 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Mtnd6P03925 172 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 S100a10P08207 97 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Pate4Q09098 99 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Wfdc9Q3UW41 83 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 EpopQ7TNS8 369 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 Eaf1Q9D4C5 268 aa12.35□□□□□ -0.43
Nup54-201ENSMUST00000038514 BsgP18572 389 aaKnown RBP12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 CapgP24452 352 aaKnown RBP12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Il3raP26952 396 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 RhobP62746 196 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Fam3dP97805 223 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Cnep1r1Q3UJ81 125 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Olfr1371Q7TQT7 311 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Rnf125Q9D9R0 233 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Pxmp4Q9JJW0 212 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Ighv9-3A0A0B4J1J5 117 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm3045A0A1D5RMA1 209 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm6665F6Y363 85 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Cldn34c3J3QJW5 233 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Cldn34c2J3QNM1 233 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Pafah1b2Q61206 229 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Cldn34c1Q8K193 234 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Olfr1323Q8VF35 309 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Mrpl42Q9CPV3 142 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Olfr972Q9EQA2 314 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Hdgfl3Q9JMG7 202 aa12.34□□□□□ -0.43
Nup54-201ENSMUST00000038514 Gm5218F6YH22 154 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Tnfsf12O54907 249 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Cst7O89098 144 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Timp3P39876 211 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Rplp1P47955 114 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Rph3alQ768S4 302 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Vma21Q78T54 101 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr513Q8VFZ3 309 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr983Q8VG90 315 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Mien1Q9CQ86 115 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Med13Q5SWW4 2171 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Trav17A0A075B655 113 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 A0A1L1SR50 188 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 A0A286YCQ8 80 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Psg18B2RSG7 476 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 P01630 113 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Hoxa3P02831 443 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 RhodP97348 210 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 UngP97931 306 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Gm10842Q3U587 122 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Patz1Q5NBY9 687 aaKnown RBP12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr25Q7TRD6 313 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Nanos1Q80WY3 267 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr1475Q8VEV6 314 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr984Q8VFN1 314 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr346Q8VGJ7 309 aa12.33□□□□□ -0.44
Nup54-201ENSMUST00000038514 Gm884A2A9H6 3643 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Trav6d-3A0A075B6B3 112 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 P01788 123 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 P01915 264 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Pdlim4P70271 330 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Trav6-3Q5R1E6 112 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Zfp420Q7TMN8 578 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Olfr399Q7TRX3 311 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Klf17Q8CFA7 341 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 EpcamQ99JW5 315 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Fam162bQ9CX19 157 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Nudt3Q9JI46 168 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Crim1Q9JLL0 1037 aa12.32□□□□□ -0.44
Nup54-201ENSMUST00000038514 Trav12d-3A0A075B6A4 115 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms